Class Hierarchy

Go to the graphical class hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

• AbstractBoundaryCondition< SPACE_DIM >
  • ConstBoundaryCondition< SPACE_DIM >
  • FunctionalBoundaryCondition< SPACE_DIM >
  • StimulusBoundaryCondition< SPACE_DIM >
• AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM >
  • AbstractPurkinjeCellFactory< ELEMENT_DIM, SPACE_DIM >
  • PlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM >
    • GeneralPlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM >
• AbstractCardiacCellFactory< 2 >
  • LuoRudySpiralWaveCellFactory
• AbstractCardiacCellFactory< DIM >
  • BathCellFactory< DIM, CELLTYPE >
  • RampedQuarterStimulusCellFactory< CELL, DIM >
  • ZeroStimulusCellFactory< CELL, DIM >
• AbstractCardiacCellFactory< SPACE_DIM >
  • HeartConfigRelatedCellFactory< SPACE_DIM >
• AbstractCardiacCellInterface
  • AbstractCardiacCell
    • AbstractBackwardEulerCardiacCell< SIZE >
    • AbstractBackwardEulerCardiacCell< 0u >
    • AbstractGeneralizedRushLarsenCardiacCell
    • AbstractRushLarsenCardiacCell
    • CML_noble_varghese_kohl_noble_1998_basic_with_sac
    • CorriasBuistICCModified
    • CorriasBuistSMCModified
    • FakeBathCell
    • FitzHughNagumo1961OdeSystem
  • AbstractCvodeCell
• AbstractCardiacMechanicsSolverInterface< DIM >
  • AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
    • ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
    • ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
• AbstractCellCycleModelOdeSolver
  • CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
  • CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
• AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator
• AbstractChasteRegion< SPACE_DIM >
  • ChasteCuboid< SPACE_DIM >
  • ChasteEllipsoid< SPACE_DIM >
  • ChasteNodesList< SPACE_DIM >
• AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >
• AbstractConductivityModifier< DIM, DIM >
  • CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM >
  • CardiacElectroMechanicsProblem< DIM >
    • CardiacElectroMechProbRegularGeom< DIM >
• AbstractConductivityModifier< ELEMENT_DIM, ELEMENT_DIM >
• AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM >
  • AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM >
  • OrthotropicConductivityTensors< ELEMENT_DIM, SPACE_DIM >
• AbstractConductivityTensors< ELEMENT_DIM, ELEMENT_DIM >
• AbstractContinuumMechanicsSolver< DIM >
  • AbstractNonlinearElasticitySolver< DIM >
    • CompressibleNonlinearElasticitySolver< DIM >
    • IncompressibleNonlinearElasticitySolver< DIM >
  • StokesFlowSolver< DIM >
• AbstractContractionCellFactory< DIM >
  • LabelBasedContractionCellFactory< DIM >
• AbstractContractionModel
  • AbstractAlgebraicContractionModel
    • ConstantActiveTension
    • FakeBathContractionModel
    • NonPhysiologicalContractionModel
  • AbstractOdeBasedContractionModel
    • Kerchoffs2003ContractionModel
    • Nash2004ContractionModel
    • NhsContractionModel
      • NhsModelWithBackwardSolver
• AbstractCryptStatistics
  • CryptProjectionStatistics
  • CryptStatistics
• AbstractDataReader
  • ColumnDataReader
• AbstractDataWriter
  • ColumnDataWriter
    • ParallelColumnDataWriter
• AbstractDynamicallyLoadableEntity
• AbstractElement< ELEMENT_DIM, SPACE_DIM >
  • AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
    • BoundaryElement< ELEMENT_DIM, SPACE_DIM >
    • Element< ELEMENT_DIM, SPACE_DIM >
  • MutableElement< ELEMENT_DIM, SPACE_DIM >
    • VertexElement< ELEMENT_DIM, SPACE_DIM >
  • MutableElement< DIM, DIM >
    • PottsElement< DIM >
• AbstractElement< 0, SPACE_DIM >
  • AbstractTetrahedralElement< 0, SPACE_DIM >
• AbstractElement< 1, SPACE_DIM >
  • MutableElement< 1, SPACE_DIM >
    • VertexElement< 1, SPACE_DIM >
• AbstractFileComparison
  • FileComparison
  • NumericFileComparison
• AbstractFunctionalCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
  • PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• AbstractHdf5Access
  • Hdf5DataReader
  • Hdf5DataWriter
• AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >
  • Hdf5ToCmguiConverter< ELEMENT_DIM, SPACE_DIM >
  • Hdf5ToMeshalyzerConverter< ELEMENT_DIM, SPACE_DIM >
  • Hdf5ToTxtConverter< ELEMENT_DIM, SPACE_DIM >
  • Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >
  • Hdf5ToXdmfConverter< ELEMENT_DIM, SPACE_DIM >
• AbstractLinearEllipticPde< ELEMENT_DIM, SPACE_DIM >
• AbstractLinearEllipticPde< DIM, DIM >
  • AveragedSourcePde< DIM >
    • VolumeDependentAveragedSourcePde< DIM >
  • CellwiseSourcePde< DIM >
  • SimpleUniformSourcePde< DIM >
• AbstractLinearParabolicPde< ELEMENT_DIM, SPACE_DIM >
• AbstractLinearParabolicPdeSystemForCoupledOdeSystem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• AbstractLookupTableCollection
• AbstractMaterialLaw< DIM >
  • AbstractCompressibleMaterialLaw< DIM >
    • AbstractIsotropicCompressibleMaterialLaw< DIM >
      • CompressibleMooneyRivlinMaterialLaw< DIM >
    • CompressibleExponentialLaw< DIM >
  • AbstractIncompressibleMaterialLaw< DIM >
    • AbstractIsotropicIncompressibleMaterialLaw< DIM >
      • ExponentialMaterialLaw< DIM >
      • MooneyRivlinMaterialLaw< DIM >
    • AbstractIsotropicIncompressibleMaterialLaw< 3 >
      • PolynomialMaterialLaw3d
    • PoleZeroMaterialLaw< DIM >
      • NashHunterPoleZeroLaw< DIM >
  • AbstractIncompressibleMaterialLaw< 2 >
    • SchmidCostaExponentialLaw2d
• AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
• AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >
  • AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
    • FemlabMeshReader< ELEMENT_DIM, SPACE_DIM >
    • MemfemMeshReader< ELEMENT_DIM, SPACE_DIM >
  • GmshMeshReader< ELEMENT_DIM, SPACE_DIM >
  • TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
  • VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
  • VtkMeshReader< ELEMENT_DIM, SPACE_DIM >
• AbstractMeshReader< SPACE_DIM, SPACE_DIM >
  • PottsMeshReader< SPACE_DIM >
• AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
  • AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
    • CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >
    • CmguiMeshWriter< DIM, DIM >
      • CmguiDeformedSolutionsWriter< DIM >
    • MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >
    • TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >
    • VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
    • XdmfMeshWriter< ELEMENT_DIM, SPACE_DIM >
      • Hdf5ToXdmfConverter< ELEMENT_DIM, SPACE_DIM >
  • VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
• AbstractMeshWriter< SPACE_DIM, SPACE_DIM >
  • PottsMeshWriter< SPACE_DIM >
• AbstractModifier
  • DummyModifier
  • FactorModifier
  • FixedModifier
  • TimeModifier
• AbstractNonlinearEllipticPde< SPACE_DIM >
• AbstractNonlinearSolver
  • SimpleNewtonNonlinearSolver
  • SimplePetscNonlinearSolver
• AbstractOdeSystemInformation
  • CellwiseOdeSystemInformation< ODE_SYSTEM >
  • CombinedOdeSystemInformation
  • OdeSystemInformation< ODE_SYSTEM >
• AbstractOutputModifier
  • ActivationOutputModifier
  • SingleTraceOutputModifier
• AbstractPerElementWriter< ELEMENT_DIM, SPACE_DIM, DATA_SIZE >
• AbstractPerElementWriter< DIM, DIM, DIM *DIM >
  • StressPerElementWriter< DIM >
• AbstractPerElementWriter< SPACE_DIM, SPACE_DIM, SPACE_DIM *SPACE_DIM >
  • StreeterFibreGenerator< SPACE_DIM >
• AbstractSteadyStateRunner
  • SteadyStateRunner
• AbstractStimulusFactory< ELEMENT_DIM, SPACE_DIM >
• AbstractStimulusFactory< DIM >
  • ElectrodesStimulusFactory< DIM >
    • ZeroNetChargeElectrodes< DIM >
• AbstractStimulusFunction
  • MultiStimulus
    • S1S2Stimulus
    • SteadyStateRestitutionStimulus
  • PurkinjeVentricularJunctionStimulus
  • RegularStimulus
    • RegularStimulusZeroNetCharge
  • SimpleStimulus
  • ZeroStimulus
• AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator
• AbstractTimeAdaptivityController
• AbstractUntemplatedConvergenceTester
  • AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
    • OdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
    • OdePdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
    • PdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
    • SpaceConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
• AbstractUntemplatedParameterisedSystem
  • AbstractParameterisedSystem< VECTOR >
  • AbstractParameterisedSystem< N_Vector >
    • AbstractCvodeSystem
      • AbstractCvodeCell
  • AbstractParameterisedSystem< std::vector< double > >
    • AbstractOdeSystem
      • AbstractCardiacCell
      • AbstractOdeBasedContractionModel
      • AbstractOdeSystemForCoupledPdeSystem
        • OdeSystemForCoupledHeatEquation
        • OdeSystemForCoupledHeatEquationWithSource
      • AbstractOdeSystemWithAnalyticJacobian
        • TysonNovak2001OdeSystem
      • Alarcon2004OxygenBasedCellCycleOdeSystem
      • CombinedOdeSystem
      • DeltaNotchOdeSystem
      • Mirams2010WntOdeSystem
      • VanLeeuwen2009WntSwatCellCycleOdeSystem
      • WntCellCycleOdeSystem
• ArchiveLocationInfo
• ArchiveOpener< Archive, Stream >
• badsubseg
• badtriang
• behavior
• enable_shared_from_this
  • Cell
  • DynamicCellModelLoader
• iterator_facade
  • AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::ElementIterator
  • AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::NodeIterator
• noncopyable
  • AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
    • BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
    • BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 3 >
  • AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
    • MonodomainTissue< ELEMENT_DIM, SPACE_DIM >
  • AbstractCardiacTissue< SPACE_DIM >
    • BidomainTissue< SPACE_DIM >
    • ExtendedBidomainTissue< SPACE_DIM >
  • AbstractCellCycleModel
    • AbstractOdeBasedCellCycleModel
      • AbstractWntOdeBasedCellCycleModel
        • AbstractVanLeeuwen2009WntSwatCellCycleModel
          • VanLeeuwen2009WntSwatCellCycleModelHypothesisOne
          • VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
        • WntCellCycleModel
          • StochasticWntCellCycleModel
      • Alarcon2004OxygenBasedCellCycleModel
      • TysonNovakCellCycleModel
    • AbstractSimpleCellCycleModel
      • AbstractSimpleGenerationBasedCellCycleModel
        • ExponentiallyDistributedStochasticDurationGenerationBasedCellCycleModel
        • FixedDurationGenerationBasedCellCycleModel
        • StochasticDurationGenerationBasedCellCycleModel
          • DeltaNotchCellCycleModel
      • ContactInhibitionCellCycleModel
      • GammaDistributedStochasticDurationCellCycleModel
      • SimpleOxygenBasedCellCycleModel
        • StochasticOxygenBasedCellCycleModel
      • SimpleWntCellCycleModel
        • SingleOdeWntCellCycleModel
      • StochasticDurationCellCycleModel
  • AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
    • AbstractContinuumMechanicsAssembler< DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
    • AbstractContinuumMechanicsAssembler< DIM, true, true >
      • StokesFlowAssembler< DIM >
        • StokesFlowPreconditionerAssembler< DIM >
    • AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
      • AbstractFeCableIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
      • AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
        • AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
        • AbstractCardiacFeVolumeIntegralAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM, true, false, CARDIAC >
          • AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
          • AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, 1 >
            • MonodomainCorrectionTermAssembler< ELEM_DIM, SPACE_DIM >
          • AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, 2 >
            • BidomainCorrectionTermAssembler< ELEM_DIM, SPACE_DIM >
        • AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 1, false, true, CARDIAC >
          • MonodomainAssembler< ELEMENT_DIM, SPACE_DIM >
        • AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 1, false, true, NORMAL >
          • MonodomainStiffnessMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
        • AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 2, false, true, CARDIAC >
          • BidomainAssembler< ELEMENT_DIM, SPACE_DIM >
            • BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >
        • AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 3, true, true, NORMAL >
          • ExtendedBidomainAssembler< ELEMENT_DIM, SPACE_DIM >
      • AbstractFeVolumeIntegralAssembler< DIM, DIM, 2, false, true, CARDIAC >
        • BidomainMassMatrixAssembler< DIM >
      • AbstractFeVolumeIntegralAssembler< DIM, DIM, 3, false, true, NORMAL >
        • ExtendedBidomainMassMatrixAssembler< DIM >
      • AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 1, false, true, NORMAL >
        • MassMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
        • StiffnessMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
      • AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL >
        • AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, INTERPOLATION_LEVEL >
        • AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL >
          • SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
          • SimpleLinearEllipticSolver< DIM, DIM >
            • CellBasedPdeSolver< DIM >
          • SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM >
        • AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NORMAL >
          • LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
      • AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, NONLINEAR >
        • AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
        • AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1 >
          • SimpleNonlinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
    • AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, false, NORMAL >
      • AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
        • NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
      • AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 2 >
        • BidomainNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM >
      • AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 3 >
        • ExtendedBidomainNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM >
  • AbstractFeAssemblerInterface< true, false >
    • ContinuumMechanicsNeumannBcsAssembler< DIM >
  • AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
    • AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
      • LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
    • AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 >
      • MonodomainSolver< ELEMENT_DIM, SPACE_DIM >
      • OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM >
      • SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM >
    • AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
      • AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
        • BidomainSolver< ELEMENT_DIM, SPACE_DIM >
    • AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
      • AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
      • AbstractExtendedBidomainSolver< ELEM_DIM, SPACE_DIM >
        • ExtendedBidomainSolver< ELEM_DIM, SPACE_DIM >
    • AbstractStaticLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
    • AbstractStaticLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 >
      • SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
      • SimpleLinearEllipticSolver< DIM, DIM >
  • AbstractMesh< ELEMENT_DIM, SPACE_DIM >
    • AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
      • DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
        • MixedDimensionMesh< ELEMENT_DIM, SPACE_DIM >
      • DistributedTetrahedralMesh< DIM, DIM >
        • DistributedQuadraticMesh< DIM >
      • TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
        • MutableMesh< ELEMENT_DIM, SPACE_DIM >
        • MutableMesh< 2, 2 >
          • Cylindrical2dMesh
        • MutableMesh< ELEMENT_DIM, ELEMENT_DIM >
        • MutableMesh< SPACE_DIM, SPACE_DIM >
          • NodesOnlyMesh< SPACE_DIM >
          • NodesOnlyMesh< 2 >
            • Cylindrical2dNodesOnlyMesh
        • NonCachedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
      • TetrahedralMesh< DIM, DIM >
        • QuadraticMesh< DIM >
    • AbstractTetrahedralMesh< DIM, DIM >
    • AbstractTetrahedralMesh< ELEMENT_DIM, ELEMENT_DIM >
    • AbstractTetrahedralMesh< SPACE_DIM, SPACE_DIM >
    • VertexMesh< ELEMENT_DIM, SPACE_DIM >
      • MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
      • MutableVertexMesh< 2, 2 >
        • Cylindrical2dVertexMesh
        • Toroidal2dVertexMesh
    • VertexMesh< ELEMENT_DIM, ELEMENT_DIM >
  • AbstractMesh< DIM, DIM >
    • PottsMesh< DIM >
  • AbstractMesh< ELEMENT_DIM, ELEMENT_DIM >
  • AbstractUntemplatedCardiacProblem
    • AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
    • AbstractCardiacProblem< DIM, DIM, 1 >
    • AbstractCardiacProblem< DIM, DIM, 2 >
      • BidomainProblem< DIM >
        • BidomainWithBathProblem< DIM >
    • AbstractCardiacProblem< DIM, DIM, 3 >
      • ExtendedBidomainProblem< DIM >
    • AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, 1 >
      • MonodomainProblem< ELEMENT_DIM, SPACE_DIM >
  • Cell
  • CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
  • CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
  • CommandLineArguments
  • DynamicModelLoaderRegistry
  • SerializableSingleton< SINGLETON_CLASS >
  • SerializableSingleton< RandomNumberGenerator >
    • RandomNumberGenerator
  • SerializableSingleton< SimulationTime >
    • SimulationTime
  • SerializableSingleton< WntConcentration< DIM > >
    • WntConcentration< DIM >
• boost::random::detail::normal_table< RealType >
• boost::random::detail::unit_normal_distribution< RealType >
• boost::random::normal_distribution_v156< RealType >
• boost::random::normal_distribution_v156< RealType >::param_type
• boost::serialization::version< AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > >
• boost::serialization::version< AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > >
• boost::serialization::version< AbstractChasteRegion< SPACE_DIM > >
• boost::serialization::version< AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > >
• Box< DIM >
• BoxCollection< DIM >
• CARDIAC_CELL
  • AbstractCardiacCellWithModifiers< CARDIAC_CELL >
• CardiacNewtonSolver< SIZE, CELLTYPE >
• CardiacSimulation
• CardiacSimulationArchiver< PROBLEM_CLASS >
• CellBasedSimulationArchiver< ELEMENT_DIM, SIM, SPACE_DIM >
• CellCycleModelOdeHandler
  • AbstractOdeBasedCellCycleModel
  • DeltaNotchCellCycleModel
  • SingleOdeWntCellCycleModel
• CellMLLoader
• CellMLToSharedLibraryConverter
• CellProperties
• CellPropertyCollection
• CellPropertyRegistry
• CellsGenerator< CELL_CYCLE_MODEL, DIM >
• CellsGenerator< CELL_CYCLE_MODEL, 2 >
  • CryptCellsGenerator< CELL_CYCLE_MODEL >
• CellwiseDataGradient< DIM >
• ChasteBuildInfo
• ChastePoint< DIM >
• ChastePoint< 0 >
• ChastePosixPathFixer
• Citations
• CombinedOdeSystem::VariableParameterMap
• CombinedOdeSystemInformation::InstancePointers
• CommandLineArgumentsMocker
• CompareDoubles
• ContinuumMechanicsProblemDefinition< DIM >
  • SolidMechanicsProblemDefinition< DIM >
    • ElectroMechanicsProblemDefinition< DIM >
  • StokesFlowProblemDefinition< DIM >
• ContractionModelInputParameters_
• CreateElectricsProblem< DIM, PROBLEM_DIM >
• CreateElectricsProblem< DIM, 1u >
• CreateElectricsProblem< DIM, 2u >
• CuboidMeshConstructor< ELEMENT_DIM, SPACE_DIM >
• CvodeData_
• GlobalFixture
  • PetscSetup
  • PetscSetup
• TestSuite
  • AbstractCellBasedTestSuite
    • AbstractCellBasedWithTimingsTestSuite
• DataAtQuadraturePoint_
• DataWriterVariable
• DiscreteSystemForceCalculator
• DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
• DistributedBoxCollection< DIM >
• DistributedBoxCollection< SPACE_DIM >
• DistributedTetrahedralMeshPartitionType
• DistributedVector
• DistributedVector::Chunk
• DistributedVector::Iterator
• DistributedVector::Stripe
• DistributedVectorException
• DistributedVectorFactory
• ELASTICITY_SOLVER
  • AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
• Electrodes< DIM >
• ElementAndWeights< DIM >
• ElementData
• event
• Exception
• ExecutableSupport
• FibreConverter
• FibreReader< DIM >
• FibreWriter< DIM >
• FileFinder
  • HeartFileFinder
• FineCoarseMeshPair< DIM >
• flipstacker
• FourthOrderTensor< DIM1, DIM2, DIM3, DIM4 >
• GaussianQuadratureRule< ELEMENT_DIM >
• GaussianQuadratureRule< DIM >
• GaussianQuadratureRule< ELEMENT_DIM-1 >
• GenericEventHandler< NUM_EVENTS, CONCRETE >
• GenericEventHandler< 1, EventHandler >
  • AbstractLookupTableCollection::EventHandler
• GenericEventHandler< 11, CellBasedEventHandler >
  • CellBasedEventHandler
• GenericEventHandler< 11, MeshEventHandler >
  • MeshEventHandler
• GenericEventHandler< 16, HeartEventHandler >
  • HeartEventHandler
• GenericEventHandler< 7, MechanicsEventHandler >
  • MechanicsEventHandler
• GmshTypes
• HeartConfig
• HeartGeometryInformation< SPACE_DIM >
• HeartGeometryInformation< ELEMENT_DIM >
• HeartRegionCode
• HoneycombMeshGenerator
  • CylindricalHoneycombMeshGenerator
• HoneycombVertexMeshGenerator
  • CylindricalHoneycombVertexMeshGenerator
  • ToroidalHoneycombVertexMeshGenerator
• Identifiable
  • AbstractCaUpdateRule< DIM >
    • DiffusionCaUpdateRule< DIM >
  • AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
    • OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
  • AbstractCellBasedSimulation< DIM >
    • OnLatticeSimulation< DIM >
  • AbstractCellBasedSimulation< ELEMENT_DIM, ELEMENT_DIM >
    • OffLatticeSimulation< 1 >
      • CryptSimulation1d
    • OffLatticeSimulation< 2 >
      • CryptSimulation2d
  • AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM >
  • AbstractCellBasedSimulationModifier< DIM, DIM >
    • AbstractTargetAreaModifier< DIM >
      • FarhadifarTypeModifier< DIM >
      • SimpleTargetAreaModifier< DIM >
    • DeltaNotchTrackingModifier< DIM >
    • VolumeTrackingModifier< DIM >
  • AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM >
    • AbstractCellPopulationCountWriter< ELEMENT_DIM, SPACE_DIM >
      • CellMutationStatesCountWriter< ELEMENT_DIM, SPACE_DIM >
      • CellProliferativePhasesCountWriter< ELEMENT_DIM, SPACE_DIM >
      • CellProliferativeTypesCountWriter< ELEMENT_DIM, SPACE_DIM >
    • AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >
      • BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >
      • CellPopulationAreaWriter< ELEMENT_DIM, SPACE_DIM >
      • CellPopulationElementWriter< ELEMENT_DIM, SPACE_DIM >
      • HeterotypicBoundaryLengthWriter< ELEMENT_DIM, SPACE_DIM >
      • NodeLocationWriter< ELEMENT_DIM, SPACE_DIM >
      • NodeVelocityWriter< ELEMENT_DIM, SPACE_DIM >
      • VertexT1SwapLocationsWriter< ELEMENT_DIM, SPACE_DIM >
      • VertexT2SwapLocationsWriter< ELEMENT_DIM, SPACE_DIM >
      • VertexT3SwapLocationsWriter< ELEMENT_DIM, SPACE_DIM >
      • VoronoiDataWriter< ELEMENT_DIM, SPACE_DIM >
    • AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >
      • CellAgesWriter< ELEMENT_DIM, SPACE_DIM >
      • CellAncestorWriter< ELEMENT_DIM, SPACE_DIM >
      • CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >
      • CellCycleModelProteinConcentrationsWriter< ELEMENT_DIM, SPACE_DIM >
      • CellIdWriter< ELEMENT_DIM, SPACE_DIM >
      • CellLabelWriter< ELEMENT_DIM, SPACE_DIM >
      • CellLocationIndexWriter< ELEMENT_DIM, SPACE_DIM >
      • CellMutationStatesWriter< ELEMENT_DIM, SPACE_DIM >
      • CellProliferativePhasesWriter< ELEMENT_DIM, SPACE_DIM >
      • CellProliferativeTypesWriter< ELEMENT_DIM, SPACE_DIM >
      • CellRadiusWriter< ELEMENT_DIM, SPACE_DIM >
      • CellVolumesWriter< ELEMENT_DIM, SPACE_DIM >
  • AbstractCellCycleModel
  • AbstractCellKiller< SPACE_DIM >
    • ApoptoticCellKiller< SPACE_DIM >
  • AbstractCellKiller< 2 >
    • RadialSloughingCellKiller
  • AbstractCellKiller< DIM >
    • IsolatedLabelledCellKiller< DIM >
    • PlaneBasedCellKiller< DIM >
    • RandomCellKiller< DIM >
    • SloughingCellKiller< DIM >
    • T2SwapCellKiller< DIM >
    • TargetedCellKiller< DIM >
  • AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
    • AbstractOffLatticeCellPopulation< ELEMENT_DIM, SPACE_DIM >
      • AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
        • MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
      • AbstractCentreBasedCellPopulation< ELEMENT_DIM, ELEMENT_DIM >
        • MeshBasedCellPopulation< DIM >
          • MeshBasedCellPopulationWithGhostNodes< DIM >
    • AbstractOffLatticeCellPopulation< ELEMENT_DIM, ELEMENT_DIM >
      • AbstractCentreBasedCellPopulation< DIM >
        • NodeBasedCellPopulation< DIM >
          • NodeBasedCellPopulationWithBuskeUpdate< DIM >
          • NodeBasedCellPopulationWithParticles< DIM >
  • AbstractCellPopulation< DIM >
    • AbstractOnLatticeCellPopulation< DIM >
      • CaBasedCellPopulation< DIM >
      • PottsBasedCellPopulation< DIM >
  • AbstractCellPopulation< ELEMENT_DIM, ELEMENT_DIM >
    • AbstractOffLatticeCellPopulation< DIM >
      • VertexBasedCellPopulation< DIM >
  • AbstractCellPopulation< SPACE_DIM >
  • AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM >
  • AbstractCellPopulationBoundaryCondition< DIM >
    • CryptSimulationBoundaryCondition< DIM >
    • PlaneBoundaryCondition< DIM >
    • SphereGeometryBoundaryCondition< DIM >
  • AbstractCellProperty
    • AbstractCellMutationState
      • ApcOneHitCellMutationState
      • ApcTwoHitCellMutationState
      • BetaCateninOneHitCellMutationState
      • WildTypeCellMutationState
    • AbstractCellProliferativeType
      • DefaultCellProliferativeType
      • DifferentiatedCellProliferativeType
      • StemCellProliferativeType
      • TransitCellProliferativeType
    • ApoptoticCellProperty
    • CellAncestor
    • CellData
    • CellId
    • CellLabel
  • AbstractForce< ELEMENT_DIM, SPACE_DIM >
    • AbstractTwoBodyInteractionForce< ELEMENT_DIM, SPACE_DIM >
      • GeneralisedLinearSpringForce< ELEMENT_DIM, SPACE_DIM >
    • AbstractTwoBodyInteractionForce< ELEMENT_DIM, ELEMENT_DIM >
      • GeneralisedLinearSpringForce< 2 >
        • CryptProjectionForce
      • GeneralisedLinearSpringForce< DIM >
        • LinearSpringWithVariableSpringConstantsForce< DIM >
        • RepulsionForce< DIM >
  • AbstractForce< DIM >
    • BuskeCompressionForce< DIM >
    • ChemotacticForce< DIM >
    • DiffusionForce< DIM >
    • FarhadifarForce< DIM >
    • NagaiHondaForce< DIM >
      • NagaiHondaDifferentialAdhesionForce< DIM >
    • VertexCryptBoundaryForce< DIM >
    • WelikyOsterForce< DIM >
  • AbstractForce< ELEMENT_DIM, ELEMENT_DIM >
    • AbstractTwoBodyInteractionForce< DIM >
      • BuskeAdhesiveForce< DIM >
      • BuskeElasticForce< DIM >
  • AbstractIvpOdeSolver
    • AbstractOneStepIvpOdeSolver
      • BackwardEulerIvpOdeSolver
      • EulerIvpOdeSolver
        • MockEulerIvpOdeSolver
      • GRL1IvpOdeSolver
      • GRL2IvpOdeSolver
      • HeunIvpOdeSolver
      • RungeKutta2IvpOdeSolver
      • RungeKutta4IvpOdeSolver
    • CvodeAdaptor
    • RungeKuttaFehlbergIvpOdeSolver
  • AbstractPottsUpdateRule< DIM >
    • AdhesionPottsUpdateRule< DIM >
      • DifferentialAdhesionPottsUpdateRule< DIM >
    • ChemotaxisPottsUpdateRule< DIM >
    • SurfaceAreaConstraintPottsUpdateRule< DIM >
    • VolumeConstraintPottsUpdateRule< DIM >
  • AbstractVertexBasedDivisionRule< SPACE_DIM >
    • DiagonalVertexBasedDivisionRule< SPACE_DIM >
    • RandomDirectionVertexBasedDivisionRule< SPACE_DIM >
    • ShortAxisVertexBasedDivisionRule< SPACE_DIM >
  • CellBasedPdeHandler< DIM >
    • CellBasedPdeHandlerOnCuboid< DIM >
  • CellBasedPdeHandler< ELEMENT_DIM >
  • CellBasedPdeHandler< SPACE_DIM >
• LessThanNode< SPACE_DIM >
• LinearBasisFunction< ELEMENT_DIM >
• LinearBasisFunction< 0 >
• LinearSystem
• LogFile
• memorypool
• mesh
• MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >::SpringIterator
• MeshPottsWriterIterators< SPACE_DIM >
• MeshWriterIterators< ELEMENT_DIM, SPACE_DIM >
• Node< SPACE_DIM >
• Node< SPACE_DIM >::ContainingBoundaryElementIterator
• Node< SPACE_DIM >::ContainingElementIterator
• NodeAttributes< SPACE_DIM >
• NodeMap
• NodePartitioner< ELEMENT_DIM, SPACE_DIM >
• NonlinearElasticityTools< DIM >
• null_deleter
• ObjectCommunicator< CLASS >
• OdeLinearSystemSolver
• OdeSolution
• osub
• otri
• OutputDirectoryFifoQueue
• OutputFileHandler
• pack< void(T)>
• PapillaryFibreCalculator
• ParallelCellsGenerator< CELL_CYCLE_MODEL, DIM >
• PCBlockDiagonal
• PCBlockDiagonal::PCBlockDiagonalContext
• PCLDUFactorisation
• PCLDUFactorisation::PCLDUFactorisationContext
• PCTwoLevelsBlockDiagonal
• PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext
• PdeAndBoundaryConditions< DIM >
• PdeSimulationTime
• PetscMatTools
• PetscSetupUtils
• PetscTools
• PetscVecTools
• PostProcessingWriter< ELEMENT_DIM, SPACE_DIM >
• PottsElementData
• PottsMesh< DIM >::PottsElementIterator
• PottsMeshGenerator< DIM >
• ProcessSpecificArchive< Archive >
• ProgressReporter
• PropagationPropertiesCalculator
• QuadraticBasisFunction< ELEMENT_DIM >
• QuadraticBasisFunction< 0 >
• QuadraticMeshHelper< DIM >
• QuadraturePointsGroup< DIM >
• RelativeTo
• ReplicatableVector
• SimpleDataWriter
• splaynode
• TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
• Timer
• TimeStepper
• VertexElementData
• VertexElementMap
• VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• VoltageInterpolaterOntoMechanicsMesh< DIM >
• VtkNonlinearElasticitySolutionWriter< DIM >
• Warnings
• XmlTools
• XmlTools::Finalizer
• XmlTransforms
• bool
• double
• Mat
• N_Vector
• NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *
• PetscInt
• static const unsigned
• vector< AbstractChasteRegion< ELEMENT_DIM > * >
• vector< boost::shared_ptr< AbstractCellBasedSimulationModifier< ELEMENT_DIM, ELEMENT_DIM > > >
• vector< boost::shared_ptr< AbstractCellKiller< ELEMENT_DIM > > >
• vector< boost::shared_ptr< AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, ELEMENT_DIM > > >
• vector< boost::shared_ptr< AbstractCellPopulationCountWriter< ELEMENT_DIM, ELEMENT_DIM > > >
• vector< boost::shared_ptr< AbstractCellPopulationWriter< ELEMENT_DIM, ELEMENT_DIM > > >
• vector< boost::shared_ptr< AbstractCellWriter< ELEMENT_DIM, ELEMENT_DIM > > >
• vector< boost::shared_ptr< AbstractForce< ELEMENT_DIM, ELEMENT_DIM > > >
• unsigned
• Vec