MonodomainProblem.hpp

/*
 
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*/
 
 
#ifndef MONODOMAINPROBLEM_HPP_
#define MONODOMAINPROBLEM_HPP_
 
#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>
 
#include "AbstractCardiacProblem.hpp"
#include "AbstractCardiacTissue.hpp"
#include "AbstractDynamicLinearPdeSolver.hpp"
#include "AbstractCardiacCellFactory.hpp"
#include "MonodomainTissue.hpp"
 
 
template<unsigned ELEMENT_DIM, unsigned SPACE_DIM = ELEMENT_DIM>
class MonodomainProblem : public AbstractCardiacProblem<ELEMENT_DIM, SPACE_DIM, 1>
{
private:
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractCardiacProblem<ELEMENT_DIM, SPACE_DIM, 1> >(*this);
        archive & mpMonodomainTissue;
    }
 
protected:
    MonodomainTissue<ELEMENT_DIM,SPACE_DIM>* mpMonodomainTissue;
 
public:
    AbstractCardiacTissue<ELEMENT_DIM, SPACE_DIM>* CreateCardiacTissue();
 
    AbstractDynamicLinearPdeSolver<ELEMENT_DIM, SPACE_DIM, 1>* CreateSolver();
 
    MonodomainProblem(AbstractCardiacCellFactory<ELEMENT_DIM,SPACE_DIM>* pCellFactory);
 
    MonodomainProblem();
 
    virtual ~MonodomainProblem();
 
    MonodomainTissue<ELEMENT_DIM,SPACE_DIM> * GetMonodomainTissue();
 
    void WriteInfo(double time);
 
    virtual void DefineWriterColumns(bool extending);
 
    virtual void WriteOneStep(double time, Vec voltageVec);
};
 
#include "SerializationExportWrapper.hpp" // Must be last
EXPORT_TEMPLATE_CLASS2(MonodomainProblem, 1, 1)
EXPORT_TEMPLATE_CLASS2(MonodomainProblem, 1, 2)
EXPORT_TEMPLATE_CLASS2(MonodomainProblem, 1, 3)
EXPORT_TEMPLATE_CLASS2(MonodomainProblem, 2, 2)
EXPORT_TEMPLATE_CLASS2(MonodomainProblem, 3, 3)
 
#endif /*MONODOMAINPROBLEM_HPP_*/