Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
QuadraturePointsGroup.cpp
1/*
2
3Copyright (c) 2005-2024, University of Oxford.
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10This file is part of Chaste.
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34*/
35
36#include "QuadraturePointsGroup.hpp"
37#include "Exception.hpp"
38
39template<unsigned DIM>
42{
43 c_vector<double, DIM> unset;
44 for (unsigned i=0; i<DIM; i++)
45 {
46 unset(i)=DOUBLE_UNSET;
47 }
48 mNumElements = rMesh.GetNumElements();
49 mNumQuadPointsPerElement = rQuadRule.GetNumQuadPoints();
50 data.resize(mNumElements*mNumQuadPointsPerElement, unset);
51
52 // Loop over elements
54 iter != rMesh.GetElementIteratorEnd();
55 ++iter)
56 {
57// Element<DIM,DIM>& r_elem = *(rMesh.GetElement(elem_index));
58 unsigned elem_index = iter->GetIndex();
59
60 c_vector<double, DIM+1> linear_phi;
61 for (unsigned quad_index=0; quad_index<rQuadRule.GetNumQuadPoints(); quad_index++)
62 {
63 const ChastePoint<DIM>& quadrature_point = rQuadRule.rGetQuadPoint(quad_index);
64
65 LinearBasisFunction<DIM>::ComputeBasisFunctions(quadrature_point, linear_phi);
66
67 // Interpolate to calculate quadrature point
68 c_vector<double,DIM> physical_quad_point = zero_vector<double>(DIM);
69 for (unsigned node_index=0; node_index<DIM+1; node_index++)
70 {
71 physical_quad_point += linear_phi(node_index)*(iter->GetNode(node_index))->rGetLocation();
72 }
73
74 // Save the quadrature point
75 assert(elem_index<mNumElements);
76 assert(quad_index<mNumQuadPointsPerElement);
77 data[ elem_index*mNumQuadPointsPerElement + quad_index ] = physical_quad_point;
78 }
79 }
80}
81
82template<unsigned DIM>
83c_vector<double,DIM>& QuadraturePointsGroup<DIM>::rGet(unsigned elementIndex, unsigned quadIndex)
84{
85 assert(elementIndex<mNumElements);
86 assert(quadIndex<mNumQuadPointsPerElement);
87 return data[ elementIndex*mNumQuadPointsPerElement + quadIndex ];
88}
89
90template<unsigned DIM>
91c_vector<double,DIM>& QuadraturePointsGroup<DIM>::rGet(unsigned i)
92{
93 assert(i < mNumElements*mNumQuadPointsPerElement);
94 return data[i];
95}
96
97template<unsigned DIM>
99{
100 return mNumElements;
101}
102
103template<unsigned DIM>
105{
106 return mNumQuadPointsPerElement;
107}
108
109template<unsigned DIM>
111{
112 return mNumElements*mNumQuadPointsPerElement;
113}
114
116
117template class QuadraturePointsGroup<1>;
118template class QuadraturePointsGroup<2>;
119template class QuadraturePointsGroup<3>;
const double DOUBLE_UNSET
Definition Exception.hpp:57
ElementIterator GetElementIteratorBegin(bool skipDeletedElements=true)
virtual unsigned GetNumElements() const
const ChastePoint< ELEMENT_DIM > & rGetQuadPoint(unsigned index) const
static void ComputeBasisFunctions(const ChastePoint< ELEMENT_DIM > &rPoint, c_vector< double, ELEMENT_DIM+1 > &rReturnValue)
c_vector< double, DIM > & rGet(unsigned elementIndex, unsigned quadIndex)
QuadraturePointsGroup(AbstractTetrahedralMesh< DIM, DIM > &rMesh, GaussianQuadratureRule< DIM > &rQuadRule)
unsigned GetNumQuadPointsPerElement() const