Chaste Release::3.1
BidomainProblem< DIM > Member List
This is the complete list of members for BidomainProblem< DIM >, including all inherited members.
AbstractCardiacProblem(AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > *pCellFactory)AbstractCardiacProblem< DIM, DIM, 2 >
AbstractCardiacProblem()AbstractCardiacProblem< DIM, DIM, 2 >
AnalyseMeshForBath()BidomainProblem< DIM > [protected]
AtBeginningOfTimestep(double time)BidomainProblem< DIM > [virtual]
BidomainProblem(AbstractCardiacCellFactory< DIM > *pCellFactory, bool hasBath=false)BidomainProblem< DIM >
BidomainProblem()BidomainProblem< DIM >
boost::serialization::access classBidomainProblem< DIM > [friend]
CardiacElectroMechanicsProblem classAbstractCardiacProblem< DIM, DIM, 2 > [friend]
CloseFilesAndPostProcess()AbstractCardiacProblem< DIM, DIM, 2 >
CreateCardiacTissue()BidomainProblem< DIM > [protected, virtual]
CreateInitialCondition()BidomainProblem< DIM > [protected, virtual]
CreateMeshFromHeartConfig()AbstractCardiacProblem< DIM, DIM, 2 > [protected, virtual]
CreateSolver()BidomainProblem< DIM > [protected, virtual]
DefineExtraVariablesWriterColumns(bool extending)AbstractCardiacProblem< DIM, DIM, 2 >
DefineWriterColumns(bool extending)BidomainProblem< DIM > [virtual]
GetBidomainTissue()BidomainProblem< DIM >
GetCurrentTime()AbstractCardiacProblem< DIM, DIM, 2 >
GetDataReader()AbstractCardiacProblem< DIM, DIM, 2 >
GetHasBath()BidomainProblem< DIM > [virtual]
GetSolution()AbstractCardiacProblem< DIM, DIM, 2 >
GetSolutionDistributedVector()AbstractCardiacProblem< DIM, DIM, 2 >
GetTissue()AbstractCardiacProblem< DIM, DIM, 2 >
Initialise()AbstractCardiacProblem< DIM, DIM, 2 >
InitialiseWriter()AbstractCardiacProblem< DIM, DIM, 2 >
load(Archive &archive, const unsigned int version)BidomainProblem< DIM > [inline, private]
LoadExtraArchive(Archive &archive, unsigned version)AbstractCardiacProblem< DIM, DIM, 2 >
LoadExtraArchiveForBidomain(Archive &archive, unsigned version)BidomainProblem< DIM >
mAllocatedMemoryForMeshAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mCurrentTimeAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mExtracelluarColumnIdBidomainProblem< DIM > [protected]
mExtraVariablesIdAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mFixedExtracellularPotentialNodesBidomainProblem< DIM > [protected]
mHasBathBidomainProblem< DIM > [protected]
mMeshFilenameAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mNodeColumnIdAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mNodesToOutputAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpBidomainTissueBidomainProblem< DIM > [protected]
mpBoundaryConditionsContainerAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpCardiacTissueAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpCellFactoryAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpDefaultBoundaryConditionsContainerAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpElectrodesBidomainProblem< DIM > [protected]
mpMeshAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mPrintOutputAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpSolverBidomainProblem< DIM > [protected]
mpTimeAdaptivityControllerAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mpWriterAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mRowForAverageOfPhiZeroedBidomainProblem< DIM > [protected]
mSolutionAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mTimeColumnIdAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mVoltageColumnIdAbstractCardiacProblem< DIM, DIM, 2 > [protected]
mWriteInfoAbstractCardiacProblem< DIM, DIM, 2 > [protected]
OnEndOfTimestep(double time)BidomainProblem< DIM > [virtual]
PreSolveChecks()BidomainProblem< DIM > [virtual]
PrintOutput(bool rPrintOutput)AbstractCardiacProblem< DIM, DIM, 2 >
rGetMesh()AbstractCardiacProblem< DIM, DIM, 2 >
save(Archive &archive, const unsigned int version) const BidomainProblem< DIM > [inline, private]
SetBoundaryConditionsContainer(BccType pBcc)AbstractCardiacProblem< DIM, DIM, 2 >
SetElectrodes()BidomainProblem< DIM > [virtual]
SetFixedExtracellularPotentialNodes(std::vector< unsigned > nodes)BidomainProblem< DIM >
SetMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)AbstractCardiacProblem< DIM, DIM, 2 >
SetNodeForAverageOfPhiZeroed(unsigned node)BidomainProblem< DIM >
SetNodesPerProcessorFilename(const std::string &rFilename)AbstractCardiacProblem< DIM, DIM, 2 >
SetOutputNodes(std::vector< unsigned > &rNodesToOutput)AbstractCardiacProblem< DIM, DIM, 2 >
SetUpAdditionalStoppingTimes(std::vector< double > &rAdditionalStoppingTimes)BidomainProblem< DIM > [virtual]
SetUseTimeAdaptivityController(bool useAdaptivity, AbstractTimeAdaptivityController *pController=NULL)AbstractCardiacProblem< DIM, DIM, 2 >
SetWriteInfo(bool writeInfo=true)AbstractCardiacProblem< DIM, DIM, 2 >
Solve()AbstractCardiacProblem< DIM, DIM, 2 >
TestBidomainWithBathProblem (defined in BidomainProblem< DIM >)BidomainProblem< DIM > [friend]
TestCardiacSimulationArchiver (defined in BidomainProblem< DIM >)BidomainProblem< DIM > [friend]
TestPCTwoLevelsBlockDiagonal (defined in BidomainProblem< DIM >)BidomainProblem< DIM > [friend]
WriteExtraVariablesOneStep()AbstractCardiacProblem< DIM, DIM, 2 >
WriteInfo(double time)BidomainProblem< DIM > [virtual]
WriteOneStep(double time, Vec voltageVec)BidomainProblem< DIM > [virtual]
~AbstractCardiacProblem()AbstractCardiacProblem< DIM, DIM, 2 > [virtual]
~AbstractUntemplatedCardiacProblem()AbstractUntemplatedCardiacProblem [inline, virtual]