, including all inherited members.
AbstractAssemblerSolverHybrid(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBoundaryConditions, unsigned numQuadPoints=2) | AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL > | [inline] |
AbstractDynamicLinearPdeSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
AbstractFeAssemblerCommon() | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | |
AbstractFeAssemblerInterface() | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | |
AbstractFeVolumeIntegralAssembler(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, unsigned numQuadPoints=2) | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | |
AbstractLinearPdeSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh) | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline] |
Assemble() | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [inline] |
AssembleMatrix() | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [inline] |
AssembleOnElement(Element< ELEMENT_DIM, SPACE_DIM > &rElement, c_matrix< double, PROBLEM_DIM *(ELEMENT_DIM+1), PROBLEM_DIM *(ELEMENT_DIM+1) > &rAElem, c_vector< double, PROBLEM_DIM *(ELEMENT_DIM+1)> &rBElem) | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [protected, virtual] |
AssembleVector() | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [inline] |
BasisFunction typedef | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [protected] |
ComputeMatrixTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, 1 > &rU, c_matrix< double, 1, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | [protected, virtual] |
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL >::ComputeMatrixTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
ComputeTransformedBasisFunctionDerivatives(const ChastePoint< ELEMENT_DIM > &rPoint, const c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rReturnValue) | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [protected] |
ComputeVectorTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, 1 > &rU, c_matrix< double, 1, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | [protected, virtual] |
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL >::ComputeVectorTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
DoAssemble() | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [protected, virtual] |
ElementAssemblyCriterion(Element< ELEMENT_DIM, SPACE_DIM > &rElement) | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
FinaliseLinearSystem(Vec currentSolution) | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |
FollowingSolveLinearSystem(Vec currentSolution) | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |
GetCurrentSolutionOrGuessValue(unsigned nodeIndex, unsigned indexOfUnknown) | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
GetLinearSystem() | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline] |
IncrementInterpolatedGradientQuantities(const c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, unsigned phiIndex, const Node< SPACE_DIM > *pNode) | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
IncrementInterpolatedQuantities(double phiI, const Node< SPACE_DIM > *pNode) | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
InitialiseForSolve(Vec initialSolution=NULL) | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [virtual] |
InitialiseHdf5Writer() | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mAssembleMatrix | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mAssembleVector | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mCurrentSolutionOrGuessReplicated | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
mFilenamePrefix | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mIdealTimeStep | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mInitialCondition | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mLastWorkingTimeStep | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mMatrixIsAssembled | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mMatrixIsConstant | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mMatrixToAssemble | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mNaturalNeumannSurfaceTermAssembler | AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL > | [protected] |
mOutputDirectory | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mOutputToParallelVtk | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mOutputToTxt | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mOutputToVtk | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mOwnershipRangeHi | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mOwnershipRangeLo | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mpBoundaryConditions | AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL > | [protected] |
mpHdf5Writer | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mpLinearSystem | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [protected] |
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL >::mpMesh | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [protected] |
AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 >::mpMesh | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [protected] |
mpParabolicPde | SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | [protected] |
mpQuadRule | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [protected] |
mPrintingTimestepMultiple | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mpTimeAdaptivityController | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mTend | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mTimesSet | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mTstart | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mVariableColumnIds | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
mVectorToAssemble | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mZeroMatrixBeforeAssembly | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
mZeroVectorBeforeAssembly | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [protected] |
PrepareForSetupLinearSystem(Vec currentSolution) | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |
ResetInterpolatedQuantities() | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
SetCurrentSolution(Vec currentSolution) | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | |
SetInitialCondition(Vec initialCondition) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetMatrixIsNotAssembled() | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetMatrixToAssemble(Mat &rMatToAssemble, bool zeroMatrixBeforeAssembly=true) | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | |
SetOutputDirectoryAndPrefix(std::string outputDirectory, std::string prefix) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetOutputToParallelVtk(bool output) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetOutputToTxt(bool output) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetOutputToVtk(bool output) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetPrintingTimestepMultiple(unsigned multiple) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetTimeAdaptivityController(AbstractTimeAdaptivityController *pTimeAdaptivityController) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetTimes(double tStart, double tEnd) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetTimeStep(double dt) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SetupGivenLinearSystem(Vec currentSolution, bool computeMatrix, LinearSystem *pLinearSystem) | AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL > | |
SetupLinearSystem(Vec currentSolution, bool computeMatrix) | SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
SetVectorToAssemble(Vec &rVecToAssemble, bool zeroVectorBeforeAssembly) | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | |
SimpleLinearParabolicSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, AbstractLinearParabolicPde< ELEMENT_DIM, SPACE_DIM > *pPde, BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 1 > *pBoundaryConditions, unsigned numQuadPoints=2) | SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | |
Solve() | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
WriteOneStep(double time, Vec solution) | AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | [protected] |
~AbstractAssemblerSolverHybrid() | AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL > | [inline, virtual] |
~AbstractFeAssemblerCommon() | AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, virtual] |
~AbstractFeAssemblerInterface() | AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | [inline, virtual] |
~AbstractFeVolumeIntegralAssembler() | AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | [inline, virtual] |
~AbstractLinearPdeSolver() | AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |