Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
ImmersedBoundaryMeshReader.hpp
1/*
2
3Copyright (c) 2005-2024, University of Oxford.
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10This file is part of Chaste.
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12Redistribution and use in source and binary forms, with or without
13modification, are permitted provided that the following conditions are met:
14 * Redistributions of source code must retain the above copyright notice,
15 this list of conditions and the following disclaimer.
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19 * Neither the name of the University of Oxford nor the names of its
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23THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
24AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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33
34*/
35
36#ifndef IMMERSEDBOUNDARYMESHREADER2D_HPP_
37#define IMMERSEDBOUNDARYMESHREADER2D_HPP_
38
39#include <string>
40#include <fstream>
41#include <cassert>
42#include <vector>
43
44#include "Exception.hpp"
45#include "AbstractMeshReader.hpp"
46
52{
54 std::vector<unsigned> NodeIndices {};
55
57 unsigned AttributeValue {};
58
61
63 unsigned fluidSourceIndex {};
64
66 std::vector<unsigned> cornerNodeIndices {};
67
70
73};
74
78template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
79class ImmersedBoundaryMeshReader : public AbstractMeshReader<ELEMENT_DIM, SPACE_DIM>
80{
81private:
82
84 std::string mFilesBaseName;
85
87 std::ifstream mNodesFile;
88
90 std::ifstream mElementsFile;
91
93 std::ifstream mLaminasFile;
94
96 std::ifstream mGridFile;
97
100
102 unsigned mNumNodes;
103
105 unsigned mNumElements;
106
108 unsigned mNumLaminas;
109
111 unsigned mNodesRead;
112
115
117 unsigned mLaminasRead;
118
121
124
127
129 unsigned mNumGridPtsX;
130
132 unsigned mNumGridPtsY;
133
136
140 void OpenFiles();
141
145 void OpenNodeFile();
146
150 void OpenElementsFile();
151
155 void OpenLaminasFile();
156
160 void OpenGridFile();
161
165 void ReadHeaders();
166
170 void CloseFiles();
171
178 void GetNextLineFromStream(std::ifstream& fileStream, std::string& rawLine);
179
180public:
181
187 ImmersedBoundaryMeshReader(std::string pathBaseName);
188
194
198 unsigned GetNumElements() const;
199
203 unsigned GetNumLaminas() const;
204
208 unsigned GetNumNodes() const;
209
213 unsigned GetNumGridPtsX() const;
214
218 unsigned GetNumGridPtsY() const;
219
223 unsigned GetNumElementAttributes() const;
224
228 unsigned GetNumLaminaAttributes() const;
229
234
238 void Reset();
239
243 std::vector<double> GetNextNode();
244
248 std::vector<double> GetNextGridRow();
249
254
259
263 unsigned GetNumFaces() const;
264
269
274};
275
276#endif /*IMMERSEDBOUNDARYMESHREADER2D_HPP_*/
ImmersedBoundaryElementData GetNextImmersedBoundaryElementData()
void GetNextLineFromStream(std::ifstream &fileStream, std::string &rawLine)
ImmersedBoundaryElementData GetNextImmersedBoundaryLaminaData()