Chaste Commit::1fd4e48e3990e67db148bc1bc4cf6991a0049d0c
Nash2004ContractionModel.hpp
1/*
2
3Copyright (c) 2005-2024, University of Oxford.
4All rights reserved.
5
6University of Oxford means the Chancellor, Masters and Scholars of the
7University of Oxford, having an administrative office at Wellington
8Square, Oxford OX1 2JD, UK.
9
10This file is part of Chaste.
11
12Redistribution and use in source and binary forms, with or without
13modification, are permitted provided that the following conditions are met:
14 * Redistributions of source code must retain the above copyright notice,
15 this list of conditions and the following disclaimer.
16 * Redistributions in binary form must reproduce the above copyright notice,
17 this list of conditions and the following disclaimer in the documentation
18 and/or other materials provided with the distribution.
19 * Neither the name of the University of Oxford nor the names of its
20 contributors may be used to endorse or promote products derived from this
21 software without specific prior written permission.
22
23THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
24AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
25IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
26ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
27LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
28CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
29GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
30HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
31LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
32OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
33
34*/
35
36#ifndef NASH2004CONTRACTIONMODEL_HPP_
37#define NASH2004CONTRACTIONMODEL_HPP_
38
39#include "AbstractOdeBasedContractionModel.hpp"
40#include "OdeSystemInformation.hpp"
41#include "Exception.hpp"
42
61{
63 static const double kTa;
64
66 static const double e0ByT0;
67
70
71public:
80
87 void EvaluateYDerivatives(double time, const std::vector<double>& rY, std::vector<double>& rDY)
88 {
89 double epsilon = (mScaledVoltage < 0.05 ? e0ByT0 : 10*e0ByT0);
90 rDY[0] = epsilon * (kTa*mScaledVoltage - rY[0]);
91 }
92
98 {
99 assert(rInputParameters.voltage != DOUBLE_UNSET);
100 mScaledVoltage = (rInputParameters.voltage+85)/125;
101 }
102
108 void SetStretchAndStretchRate(double stretch, double stretchRate)
109 {
110 }
111
116 {
117 return rGetStateVariables()[0];
118 }
119
125 {
126 return mTemporaryStateVariables[0];
127 }
128
129
134 {
135 return false;
136 }
137
142 {
143 return false;
144 }
145};
146
147#endif /*NASH2004CONTRACTIONMODEL_HPP_*/
const double DOUBLE_UNSET
Definition Exception.hpp:57
boost::shared_ptr< AbstractOdeSystemInformation > mpSystemInfo
void SetInputParameters(ContractionModelInputParameters &rInputParameters)
void SetStretchAndStretchRate(double stretch, double stretchRate)
void EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY)
static boost::shared_ptr< OdeSystemInformation< ODE_SYSTEM > > Instance()