Chaste Commit::ca8ccdedf819b6e02855bc0e8e6f50bdecbc5208
CombinedOdeSystemInformation.cpp
1/*
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34*/
35
36
37#include "CombinedOdeSystemInformation.hpp"
38
39#include <cassert>
40
41boost::shared_ptr<CombinedOdeSystemInformation> CombinedOdeSystemInformation::Instance(const std::vector<AbstractOdeSystem*>& rSubsystems)
42{
43 // Get the information for the subsystems
44 std::vector<boost::shared_ptr<const AbstractOdeSystemInformation> > info_vec;
45 info_vec.reserve(rSubsystems.size());
46 for (unsigned i=0; i<rSubsystems.size(); i++)
47 {
48 info_vec.push_back(rSubsystems[i]->GetSystemInformation());
49 }
50
51 boost::shared_ptr<CombinedOdeSystemInformation> p_inst;
52
53 // Search to see if we have an information object for this sequence of
54 // subsystems already.
55 for (unsigned i=0; i<msInstances.size(); i++)
56 {
57 if (info_vec.size() == msInstances[i].subsystemInformation.size())
58 {
59 bool equal = true;
60 for (unsigned j=0; j<info_vec.size(); j++)
61 {
62 if (msInstances[i].subsystemInformation[j] != info_vec[j])
63 {
64 equal = false;
65 break;
66 }
67 }
68 if (equal)
69 {
70 p_inst = msInstances[i].pInfoInstance;
71 break;
72 }
73 }
74 }
75
76 // Create a new object if needed
77 if (!p_inst)
78 {
79 p_inst.reset(new CombinedOdeSystemInformation(info_vec));
80 struct InstancePointers inst;
81 inst.subsystemInformation = info_vec;
82 inst.pInfoInstance = p_inst;
83 msInstances.push_back(inst);
84 }
85
86 return p_inst;
87}
88
89CombinedOdeSystemInformation::CombinedOdeSystemInformation(const std::vector<boost::shared_ptr<const AbstractOdeSystemInformation> >& rSubsystemInfo)
90{
91 // Figure out our size
92 unsigned total_system_size = 0u;
93 for (unsigned i=0; i<rSubsystemInfo.size(); i++)
94 {
95 total_system_size += rSubsystemInfo[i]->rGetStateVariableNames().size();
96 }
97 mVariableNames.reserve(total_system_size);
98 mVariableUnits.reserve(total_system_size);
99 mInitialConditions.reserve(total_system_size);
100
101 // Set up our info from the subsystems
102 for (unsigned i=0; i<rSubsystemInfo.size(); i++)
103 {
104 std::vector<double> inits = rSubsystemInfo[i]->GetInitialConditions();
105 const std::vector<std::string>& names = rSubsystemInfo[i]->rGetStateVariableNames();
106 const std::vector<std::string>& units = rSubsystemInfo[i]->rGetStateVariableUnits();
107 unsigned system_size = names.size();
108 assert(inits.size() == system_size);
109 assert(units.size() == system_size);
110
111 for (unsigned j=0; j<system_size; j++)
112 {
113 mVariableNames.push_back(names[j]);
114 mVariableUnits.push_back(units[j]);
115 mInitialConditions.push_back(inits[j]);
116 }
117 }
118
119 mInitialised = true;
120}
121
122// LCOV_EXCL_START
124{
125 // does nothing; work done in constructor
126 // but we need the method because it is pure in our base class
127}
128
130std::vector<struct CombinedOdeSystemInformation::InstancePointers> CombinedOdeSystemInformation::msInstances;
131// LCOV_EXCL_STOP
CombinedOdeSystemInformation(const std::vector< boost::shared_ptr< const AbstractOdeSystemInformation > > &rSubsystemInfo)
static std::vector< struct InstancePointers > msInstances
static boost::shared_ptr< CombinedOdeSystemInformation > Instance(const std::vector< AbstractOdeSystem * > &rSubsystems)
boost::shared_ptr< CombinedOdeSystemInformation > pInfoInstance
std::vector< boost::shared_ptr< const AbstractOdeSystemInformation > > subsystemInformation