Here is a list of all documented functions with links to the class documentation for each member:

- i -

• IdentifySwapType() : MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
• IgnoreBlankLines() : FileComparison
• IgnoreLinesContaining() : FileComparison
• ImmersedBoundary2dArrays() : ImmersedBoundary2dArrays< DIM >
• ImmersedBoundaryBoundaryCellWriter() : ImmersedBoundaryBoundaryCellWriter< ELEMENT_DIM, SPACE_DIM >
• ImmersedBoundaryCellPopulation() : ImmersedBoundaryCellPopulation< DIM >
• ImmersedBoundaryElement() : ImmersedBoundaryElement< ELEMENT_DIM, SPACE_DIM >, ImmersedBoundaryElement< 1, SPACE_DIM >
• ImmersedBoundaryElementIterator() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >::ImmersedBoundaryElementIterator
• ImmersedBoundaryFftInterface() : ImmersedBoundaryFftInterface< DIM >
• ImmersedBoundaryHoneycombMeshGenerator() : ImmersedBoundaryHoneycombMeshGenerator
• ImmersedBoundaryKinematicFeedbackForce() : ImmersedBoundaryKinematicFeedbackForce< DIM >
• ImmersedBoundaryLaminaIterator() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >::ImmersedBoundaryLaminaIterator
• ImmersedBoundaryLinearDifferentialAdhesionForce() : ImmersedBoundaryLinearDifferentialAdhesionForce< DIM >
• ImmersedBoundaryLinearInteractionForce() : ImmersedBoundaryLinearInteractionForce< DIM >
• ImmersedBoundaryLinearMembraneForce() : ImmersedBoundaryLinearMembraneForce< DIM >
• ImmersedBoundaryMesh() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
• ImmersedBoundaryMeshReader() : ImmersedBoundaryMeshReader< ELEMENT_DIM, SPACE_DIM >
• ImmersedBoundaryMeshWriter() : ImmersedBoundaryMeshWriter< ELEMENT_DIM, SPACE_DIM >
• ImmersedBoundaryMorseInteractionForce() : ImmersedBoundaryMorseInteractionForce< DIM >
• ImmersedBoundaryMorseMembraneForce() : ImmersedBoundaryMorseMembraneForce< DIM >
• ImmersedBoundaryNeighbourNumberWriter() : ImmersedBoundaryNeighbourNumberWriter< ELEMENT_DIM, SPACE_DIM >
• ImmersedBoundaryPalisadeMeshGenerator() : ImmersedBoundaryPalisadeMeshGenerator
• ImmersedBoundarySimulationModifier() : ImmersedBoundarySimulationModifier< DIM >
• ImmersedBoundarySvgWriter() : ImmersedBoundarySvgWriter< DIM >
• ImplicitCardiacMechanicsSolver() : ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
• ImplicitSolveForQ() : NhsModelWithBackwardSolver
• ImportFromMesher() : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
• ImposeBoundaryCondition() : AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM >, CryptSimulationBoundaryCondition< DIM >, PlaneBoundaryCondition< ELEMENT_DIM, SPACE_DIM >, SlidingBoundaryCondition< DIM >, SphereGeometryBoundaryCondition< DIM >
• ImposeBoundaryConditions() : AbstractNumericalMethod< ELEMENT_DIM, SPACE_DIM >
• IncludesPoint() : Element< ELEMENT_DIM, SPACE_DIM >
• IncompressibleNonlinearElasticitySolver() : IncompressibleNonlinearElasticitySolver< DIM >
• increment() : AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::ElementIterator, AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::NodeIterator
• IncrementCellCount() : AbstractCellProperty
• IncrementInterpolatedGradientQuantities() : AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
• IncrementInterpolatedQuantities() : AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >, AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >, CellBasedEllipticPdeSolver< DIM >, CellBasedParabolicPdeSolver< DIM >, LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• IncrementTimeOneStep() : SimulationTime
• Init() : AbstractCardiacCell, AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM >, AbstractCvodeSystem, Alarcon2004OxygenBasedCellCycleOdeSystem, AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM >, Mirams2010WntOdeSystem, OrthotropicConductivityTensors< ELEMENT_DIM, SPACE_DIM >, TysonNovak2001OdeSystem, VanLeeuwen2009WntSwatCellCycleOdeSystem, WntCellCycleOdeSystem
• Initialise() : AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >, AbstractCardiacMechanicsSolverInterface< DIM >, AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >, AbstractCellCycleModel, AbstractCellCycleModelOdeSolver, AbstractOdeSrnModel, AbstractOdeSystemInformation, AbstractSimpleCellCycleModel, AbstractSimplePhaseBasedCellCycleModel, AbstractSrnModel, AbstractVanLeeuwen2009WntSwatCellCycleModel, Alarcon2004OxygenBasedCellCycleModel, CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM >, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >, CellSrnModel, CellwiseOdeSystemInformation< ODE_SYSTEM >, CombinedOdeSystemInformation, DeltaNotchEdgeSrnModel, DeltaNotchInteriorSrnModel, DeltaNotchSrnModel, Goldbeter1991SrnModel, OdeSystemInformation< ODE_SYSTEM >, SingleOdeWntCellCycleModel, StochasticOxygenBasedCellCycleModel, StochasticWntCellCycleModel, TysonNovakCellCycleModel, WntCellCycleModel
• InitialiseAtStart() : AbstractOutputModifier, ActivationOutputModifier, SingleTraceOutputModifier
• InitialiseCellCycleModel() : Cell
• InitialiseCellPdeElementMap() : AbstractBoxDomainPdeModifier< DIM >
• InitialiseCells() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
• InitialiseDaughterCell() : AbstractCellCycleModel, AbstractSimpleCellCycleModel, AbstractSimpleGenerationalCellCycleModel, AbstractSimplePhaseBasedCellCycleModel, AbstractSrnModel, DeltaNotchEdgeSrnModel, SimpleWntCellCycleModel, StochasticOxygenBasedCellCycleModel, StochasticWntCellCycleModel, TysonNovakCellCycleModel
• InitialiseForSolve() : AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >, AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >, AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >, BidomainSolver< ELEMENT_DIM, SPACE_DIM >, CellBasedEllipticPdeSolver< DIM >, ExtendedBidomainSolver< ELEM_DIM, SPACE_DIM >, LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >, MonodomainPurkinjeSolver< ELEMENT_DIM, SPACE_DIM >, MonodomainSolver< ELEMENT_DIM, SPACE_DIM >, OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM >, SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
• InitialiseHdf5Writer() : AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• InitialiseOdeSystem() : AbstractVanLeeuwen2009WntSwatCellCycleModel, VanLeeuwen2009WntSwatCellCycleModelHypothesisOne, VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
• InitialisePetsc() : PetscSetupUtils
• InitialiseSrnModel() : Cell
• InitialiseTriangulateIo() : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
• InitialiseWriter() : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• InitializePetsc() : ExecutableSupport
• Instance() : CardiacNewtonSolver< SIZE, CELLTYPE >, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >, CellCycleTimesGenerator, CellPropertyRegistry, CombinedOdeSystemInformation, CommandLineArguments, DynamicModelLoaderRegistry, GenericEventHandler< NUM_EVENTS, CONCRETE >, HeartConfig, LogFile, OdeSystemInformation< ODE_SYSTEM >, RandomNumberGenerator, SimulationTime, Warnings, WntConcentration< DIM >
• InternalSolve() : AbstractOneStepIvpOdeSolver, MockEulerIvpOdeSolver, RungeKuttaFehlbergIvpOdeSolver
• Interpolate() : UniformGridRandomFieldGenerator< SPACE_DIM >
• IRecvObject() : ObjectCommunicator< CLASS >
• IsAbsolutePath() : FileFinder
• IsAdaptive() : AbstractCellCycleModelOdeSolver, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
• IsAdaptivityParametersPresent() : HeartConfig
• IsAllowedElement() : AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator, ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >::ImmersedBoundaryElementIterator, PottsMesh< DIM >::PottsElementIterator, VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• IsAllowedLamina() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >::ImmersedBoundaryLaminaIterator
• IsAllowedNode() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
• IsANodeCloseToDomainBoundary() : NodesOnlyMesh< SPACE_DIM >
• IsAnyNodalTimeTraceRequested() : HeartConfig
• IsApdMapsRequested() : HeartConfig
• IsAtEnd() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator, AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator, ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >::ImmersedBoundaryElementIterator, ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >::ImmersedBoundaryLaminaIterator, PottsMesh< DIM >::PottsElementIterator, VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• IsBinary() : FibreReader< DIM >
• IsBoundaryEdge() : Edge< SPACE_DIM >
• IsBoundaryNode() : Node< SPACE_DIM >
• IsBoxInDomain() : ObsoleteBoxCollection< DIM >
• IsBoxOwned() : DistributedBoxCollection< DIM >, ObsoleteBoxCollection< DIM >
• IsCellAssociatedWithADeletedLocation() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, CaBasedCellPopulation< DIM >, ImmersedBoundaryCellPopulation< DIM >, PottsBasedCellPopulation< DIM >, VertexBasedCellPopulation< DIM >
• IsCellAttachedToLocationIndex() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
• IsCellOnBoundary() : ImmersedBoundaryCellPopulation< DIM >
• IsConductionVelocityMapsRequested() : HeartConfig
• IsConverged() : AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
• IsDataComplete() : AbstractHdf5Access
• IsDead() : Cell
• IsDeleted() : AbstractElement< ELEMENT_DIM, SPACE_DIM >, Edge< SPACE_DIM >, Node< SPACE_DIM >, NodeMap, VertexElementMap
• IsDir() : FileFinder
• IsElectrodesPresent() : HeartConfig
• IsElementIndexRemapped() : EdgeOperation
• IsElementOnBoundary() : ImmersedBoundaryElement< ELEMENT_DIM, SPACE_DIM >, ImmersedBoundaryElement< 1, SPACE_DIM >, MutableElement< ELEMENT_DIM, SPACE_DIM >, MutableElement< 1, SPACE_DIM >
• IsEmpty() : FileFinder
• IsEnabled() : GenericEventHandler< NUM_EVENTS, CONCRETE >
• IsEnabledImpl() : GenericEventHandler< NUM_EVENTS, CONCRETE >
• ISendObject() : ObjectCommunicator< CLASS >
• IsEndTimeAndNumberOfTimeStepsSetUp() : SimulationTime
• IsFastOnly() : AbstractCardiacCell
• IsFile() : FileFinder
• IsFileFormatBinary() : AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >, TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
• IsFileSet() : LogFile
• IsFinished() : SimulationTime
• IsGhostNode() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, MeshBasedCellPopulationWithGhostNodes< DIM >
• IsGlobalIndexLocal() : DistributedVector, DistributedVectorFactory
• IsHaloBox() : DistributedBoxCollection< DIM >
• IsHomogeneousMaterial() : SolidMechanicsProblemDefinition< DIM >
• IsIdentityMap() : NodeMap, VertexElementMap
• IsImplicitSolver() : AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >, ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >, ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
• IsInDefineMode() : Hdf5DataWriter
• IsIndexPenultimate() : ObsoleteBoxCollection< DIM >
• IsInitialised() : PetscTools
• IsInteriorBox() : DistributedBoxCollection< DIM >
• IsInternal() : Node< SPACE_DIM >
• IsIsolated() : PetscTools
• IsLabelled() : Alarcon2004OxygenBasedCellCycleOdeSystem
• IsLogged() : Cell
• IsMarkedSpring() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
• IsMatrixSymmetric() : LinearSystem
• IsMaxUpstrokeVelocityMapRequested() : HeartConfig
• IsMeshChanging() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
• IsMeshOnDisk() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
• IsMeshProvided() : HeartConfig
• IsNearExistingNodes() : VertexMesh< ELEMENT_DIM, SPACE_DIM >
• IsNearZero() : CompareDoubles
• IsNeumannBoundaryCondition() : AbstractPdeModifier< DIM >
• IsNewerThan() : FileFinder
• IsNodeOnBase() : CryptShovingCaBasedDivisionRule
• IsNodeOnBoundary() : ShovingCaBasedDivisionRule< SPACE_DIM >
• IsolatedLabelledCellKiller() : IsolatedLabelledCellKiller< DIM >
• IsolateProcesses() : PetscTools
• IsOutputVisualizerPresent() : HeartConfig
• IsOwned() : DistributedBoxCollection< DIM >, NodesOnlyMesh< SPACE_DIM >, ObsoleteBoxCollection< DIM >
• IsParallel() : PetscTools
• IsParticle() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, Node< SPACE_DIM >, NodeAttributes< SPACE_DIM >, NodeBasedCellPopulationWithParticles< DIM >
• IsPathSet() : FileFinder
• IsPdeNodeAssociatedWithNonApoptoticCell() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, CaBasedCellPopulation< DIM >, ImmersedBoundaryCellPopulation< DIM >, VertexBasedCellPopulation< DIM >
• IsPostProcessingRequested() : HeartConfig
• IsPostProcessingSectionPresent() : HeartConfig
• IsPseudoEcgCalculationRequested() : HeartConfig
• IsRealCell() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator
• IsRegionBath() : HeartRegionCode
• IsRegionTissue() : HeartRegionCode
• IsRoomToDivide() : AbstractCaBasedDivisionRule< SPACE_DIM >, AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, CaBasedCellPopulation< DIM >, CryptShovingCaBasedDivisionRule, ExclusionCaBasedDivisionRule< SPACE_DIM >, ShovingCaBasedDivisionRule< SPACE_DIM >
• IsSame() : AbstractCellProperty
• IsSamePoint() : ChastePoint< DIM >
• IsSequential() : PetscTools
• IsSetUp() : AbstractCellCycleModelOdeSolver, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
• IsSimulationDefined() : HeartConfig
• IsSimulationResumed() : HeartConfig
• IsSiteAvailable() : CaBasedCellPopulation< DIM >
• IsSourceAssociatedWithElement() : FluidSource< SPACE_DIM >
• IsStartTimeSetUp() : SimulationTime
• IsStretchDependent() : AbstractContractionModel, ConstantActiveTension, FakeBathContractionModel, Kerchoffs2003ContractionModel, Nash2004ContractionModel, NhsContractionModel, NonPhysiologicalContractionModel
• IsStretchRateDependent() : AbstractContractionModel, ConstantActiveTension, FakeBathContractionModel, Kerchoffs2003ContractionModel, Nash2004ContractionModel, NhsContractionModel, NonPhysiologicalContractionModel
• IsSubType() : AbstractCellProperty
• IsTerminal() : StepSizeException
• IsTimeAtEnd() : TimeStepper
• IsType() : AbstractCellProperty
• IsUpstrokeTimeMapsRequested() : HeartConfig
• IsWntSetUp() : WntConcentration< DIM >
• IsWorkingCopyModified() : ChasteBuildInfo
• Iterator() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator