ShovingCaBasedDivisionRule< SPACE_DIM > Class Template Reference

#include <ShovingCaBasedDivisionRule.hpp>

Inheritance diagram for ShovingCaBasedDivisionRule< SPACE_DIM >:

Collaboration diagram for ShovingCaBasedDivisionRule< SPACE_DIM >:

Public Member Functions
	ShovingCaBasedDivisionRule ()
virtual	~ShovingCaBasedDivisionRule ()
void	IsNodeOnBoundary (unsigned numNeighbours)
virtual bool	IsRoomToDivide (CellPtr pParentCell, CaBasedCellPopulation< SPACE_DIM > &rCellPopulation)
virtual unsigned	CalculateDaughterNodeIndex (CellPtr pNewCell, CellPtr pParentCell, CaBasedCellPopulation< SPACE_DIM > &rCellPopulation)
Public Member Functions inherited from AbstractCaBasedDivisionRule< SPACE_DIM >
	AbstractCaBasedDivisionRule ()
virtual	~AbstractCaBasedDivisionRule ()
void	OutputCellCaBasedDivisionRuleInfo (out_stream &rParamsFile)
Public Member Functions inherited from Identifiable
virtual	~Identifiable ()
std::string	GetIdentifier () const

Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)

Friends
class	boost::serialization::access

Additional Inherited Members
Protected Member Functions inherited from AbstractCaBasedDivisionRule< SPACE_DIM >
virtual void	OutputCellCaBasedDivisionRuleParameters (out_stream &rParamsFile)

Detailed Description

template<unsigned SPACE_DIM>
class ShovingCaBasedDivisionRule< SPACE_DIM >

A division rule for CA-based cell populations that specifies how cells divide. Here they can divide in any direction and shove other cells out of the way in that direction.

Definition at line 54 of file ShovingCaBasedDivisionRule.hpp.

Constructor & Destructor Documentation

ShovingCaBasedDivisionRule()

template<unsigned SPACE_DIM>

ShovingCaBasedDivisionRule< SPACE_DIM >::ShovingCaBasedDivisionRule ( )

inline

Default constructor.

Definition at line 76 of file ShovingCaBasedDivisionRule.hpp.

~ShovingCaBasedDivisionRule()

template<unsigned SPACE_DIM>

virtual ShovingCaBasedDivisionRule< SPACE_DIM >::~ShovingCaBasedDivisionRule ( )

inlinevirtual

Empty destructor.

Definition at line 81 of file ShovingCaBasedDivisionRule.hpp.

Member Function Documentation

CalculateDaughterNodeIndex()

template<unsigned SPACE_DIM>

unsigned ShovingCaBasedDivisionRule< SPACE_DIM >::CalculateDaughterNodeIndex ( CellPtr  pNewCell, CellPtr  pParentCell, CaBasedCellPopulation< SPACE_DIM > &  rCellPopulation  )

virtual

Return the index for the daughter node. This method can be used to move cells out of the way as necessary.

Parameters

pNewCell	The cell to new cell
pParentCell	The parent cell
rCellPopulation	The CA-based cell population

Returns

the node index for the daughter cell.

Implements AbstractCaBasedDivisionRule< SPACE_DIM >.

Definition at line 68 of file ShovingCaBasedDivisionRule.cpp.

References CaBasedCellPopulation< DIM >::EvaluateDivisionPropensity(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::GetCellUsingLocationIndex(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::GetLocationIndexUsingCell(), PottsMesh< DIM >::GetMooreNeighbouringNodeIndices(), RandomNumberGenerator::Instance(), CaBasedCellPopulation< DIM >::IsSiteAvailable(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::MoveCellInLocationMap(), RandomNumberGenerator::ranf(), CaBasedCellPopulation< DIM >::rGetMesh(), and UNSIGNED_UNSET.

IsNodeOnBoundary()

template<unsigned SPACE_DIM>

void ShovingCaBasedDivisionRule< SPACE_DIM >::IsNodeOnBoundary

(

unsigned

numNeighbours

)

Helper method to see if cells are on the boundary of the domain. Throws exception if cells boundary of the domain.

Parameters

numNeighbours

the number of neighbours of the node.

Definition at line 40 of file ShovingCaBasedDivisionRule.cpp.

References EXCEPTION, and NEVER_REACHED.

IsRoomToDivide()

template<unsigned SPACE_DIM>

bool ShovingCaBasedDivisionRule< SPACE_DIM >::IsRoomToDivide ( CellPtr  pParentCell, CaBasedCellPopulation< SPACE_DIM > &  rCellPopulation  )

virtual

Return whether there is room to divide at all.

Parameters

pParentCell	The cell to divide
rCellPopulation	The CA-based cell population

Returns

if the site is available.

Implements AbstractCaBasedDivisionRule< SPACE_DIM >.

Definition at line 62 of file ShovingCaBasedDivisionRule.cpp.

serialize()

template<unsigned SPACE_DIM>

template<class Archive >

void ShovingCaBasedDivisionRule< SPACE_DIM >::serialize ( Archive &  archive, const unsigned int  version  )

inlineprivate

Serialize the object and its member variables.

Parameters

archive	the archive
version	the current version of this class

Definition at line 66 of file ShovingCaBasedDivisionRule.hpp.

Friends And Related Symbol Documentation

boost::serialization::access

template<unsigned SPACE_DIM>

friend class boost::serialization::access

friend

Definition at line 58 of file ShovingCaBasedDivisionRule.hpp.

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The documentation for this class was generated from the following files:

• cell_based/src/population/division_rules/ShovingCaBasedDivisionRule.hpp
• cell_based/src/population/division_rules/ShovingCaBasedDivisionRule.cpp