Here is a list of all documented class members with links to the class documentation for each member:
- r -
- R : CorriasBuistICCModified, CorriasBuistSMCModified
- RadialCellDataDistributionWriter() : RadialCellDataDistributionWriter< ELEMENT_DIM, SPACE_DIM >
- RadialSloughingCellKiller() : RadialSloughingCellKiller
- RampedQuarterStimulusCellFactory() : RampedQuarterStimulusCellFactory< CELL, DIM >
- randMod() : RandomNumberGenerator
- RandomCaSwitchingUpdateRule() : RandomCaSwitchingUpdateRule< DIM >
- RandomCellKiller() : RandomCellKiller< DIM >
- RandomDirectionCentreBasedDivisionRule() : RandomDirectionCentreBasedDivisionRule< ELEMENT_DIM, SPACE_DIM >
- RandomDirectionVertexBasedDivisionRule() : RandomDirectionVertexBasedDivisionRule< SPACE_DIM >
- RandomNumberGenerator() : RandomNumberGenerator
- ranf() : RandomNumberGenerator
- rCalculateModifiedConductivityTensor() : AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >, CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM >
- ReadColumnFromFile() : ColumnDataReader
- ReadElementHeader() : GmshMeshReader< ELEMENT_DIM, SPACE_DIM >
- ReadFaceHeader() : GmshMeshReader< ELEMENT_DIM, SPACE_DIM >
- ReadFibreSheetDirectionsFromFile() : ElectroMechanicsProblemDefinition< DIM >
- ReadFile() : HeartConfig
- ReadFileToDomDocument() : XmlTools
- ReadHeaders() : GmshMeshReader< ELEMENT_DIM, SPACE_DIM >, ImmersedBoundaryMeshReader< ELEMENT_DIM, SPACE_DIM >, PottsMeshReader< SPACE_DIM >, TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >, VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
- ReadJunctionsFile() : AbstractPurkinjeCellFactory< ELEMENT_DIM, SPACE_DIM >
- ReadNextToken() : NumericFileComparison
- ReadNodeHeader() : GmshMeshReader< ELEMENT_DIM, SPACE_DIM >
- ReadNodesPerProcessorFile() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- ReadNumLinesOfDataFromFile() : FibreReader< DIM >
- ReadParametersFromFile() : CardiacSimulation
- ReadPetscObject() : PetscTools
- ReadValueFromFile() : ColumnDataReader
- ReadXmlFile() : XmlTools
- ReadyToDivide() : AbstractCellCycleModel, AbstractOdeBasedCellCycleModel, AbstractPhaseBasedCellCycleModel, AbstractSimpleCellCycleModel, AlwaysDivideCellCycleModel, BernoulliTrialCellCycleModel, BiasedBernoulliTrialCellCycleModel, Cell, LabelDependentBernoulliTrialCellCycleModel, NoCellCycleModel
- RebuildEdges() : MutableElement< ELEMENT_DIM, SPACE_DIM >, MutableElement< 1, SPACE_DIM >
- RecalculateAverageNodeSpacings() : ImmersedBoundarySimulationModifier< DIM >
- ReconstructCylindricalMesh() : Cylindrical2dMesh, Toroidal2dMesh
- ReconstructToroidalMesh() : Toroidal2dMesh
- RecordCellDivideOperation() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordCellDivisionInfo() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordEdgeMergeOperation() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordEdgeSplitOperation() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordNewEdgeOperation() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordNodeMergeOperation() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordStoppingPoint() : AbstractCvodeSystem, CvodeAdaptor
- RecordT1Swap() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordT2Swap() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecordT3Swap() : VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >
- RecvObject() : ObjectCommunicator< CLASS >
- RefineElement() : MutableMesh< ELEMENT_DIM, SPACE_DIM >
- RefreshHaloCells() : NodeBasedCellPopulation< DIM >
- RefreshJacobian() : AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
- RefreshJacobianCachedData() : NonCachedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RefreshMesh() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >, Cylindrical2dNodesOnlyMesh, PeriodicNodesOnlyMesh< SPACE_DIM >, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >, Toroidal2dMesh
- RegenerateTables() : AbstractLookupTableCollection
- Register() : Citations
- RegisterBoundaryElement() : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterCableElement() : MixedDimensionMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterElement() : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterHaloNode() : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterNode() : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterWithEdges() : MutableElement< ELEMENT_DIM, SPACE_DIM >, MutableElement< 1, SPACE_DIM >
- RegisterWithNodes() : AbstractElement< ELEMENT_DIM, SPACE_DIM >, BoundaryElement< ELEMENT_DIM, SPACE_DIM >, Element< ELEMENT_DIM, SPACE_DIM >, MutableElement< ELEMENT_DIM, SPACE_DIM >, MutableElement< 1, SPACE_DIM >
- RegularStimulus() : RegularStimulus
- RegularStimulusZeroNetCharge() : RegularStimulusZeroNetCharge
- ReIndex() : MutableMesh< ELEMENT_DIM, SPACE_DIM >
- RelativeConvergenceCriterion : AbstractUntemplatedConvergenceTester
- RemapCellSrn() : VertexBasedPopulationSrn< DIM >
- ReMesh() : Cylindrical2dMesh, ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >, MutableMesh< ELEMENT_DIM, SPACE_DIM >, MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >, NodesOnlyMesh< SPACE_DIM >, Toroidal2dMesh
- ReMeshElement() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- ReMeshLamina() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- Remove() : FileFinder
- RemoveAllCellKillers() : AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
- RemoveAllCellPopulationBoundaryConditions() : OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
- RemoveAllForces() : OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
- RemoveAllUpdateRules() : AbstractOnLatticeCellPopulation< DIM >, CaBasedCellPopulation< DIM >, OnLatticeSimulation< DIM >
- RemoveBoundaryElement() : Node< SPACE_DIM >
- RemoveCellProperty() : Cell
- RemoveCellUsingLocationIndex() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, CaBasedCellPopulation< DIM >
- RemoveDeadCells() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, CaBasedCellPopulation< DIM >, ImmersedBoundaryCellPopulation< DIM >, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, NodeBasedCellPopulation< DIM >, PottsBasedCellPopulation< DIM >, VertexBasedCellPopulation< DIM >
- RemoveDeletedEdges() : EdgeHelper< SPACE_DIM >
- RemoveDeletedElements() : PottsMesh< DIM >
- RemoveDeletedNodes() : MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >, NodesOnlyMesh< SPACE_DIM >
- RemoveDeletedNodesAndElements() : MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
- RemoveDuplicateNeighbours() : Node< SPACE_DIM >, NodeAttributes< SPACE_DIM >
- RemoveElement() : Edge< SPACE_DIM >, Node< SPACE_DIM >
- RemoveGhostNode() : MeshBasedCellPopulationWithGhostNodes< DIM >
- RemoveNode() : Box< DIM >
- RemoveNodes() : Edge< SPACE_DIM >
- RemoveNullSpace() : LinearSystem
- RemovePetscContext() : ReplicatableVector
- RemovePressureDummyValuesThroughLinearInterpolation() : AbstractContinuumMechanicsSolver< DIM >
- RemoveProperty() : CellPropertyCollection
- ReorderNodes() : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- ReplaceNode() : AbstractElement< ELEMENT_DIM, SPACE_DIM >, Edge< SPACE_DIM >
- ReplaceSpacesWithUnderscores() : FileFinder
- ReplaceUnderscoresWithSpaces() : FileFinder
- ReplicatableVector() : ReplicatableVector
- Replicate() : ReplicatableVector
- ReplicateAdditionalCaches() : ExtendedBidomainTissue< SPACE_DIM >
- ReplicateBool() : PetscTools
- ReplicateCaches() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- ReplicateException() : PetscTools
- ReplicatePetscVector() : ReplicatableVector
- Report() : GenericEventHandler< NUM_EVENTS, CONCRETE >
- ReportImpl() : GenericEventHandler< NUM_EVENTS, CONCRETE >
- RepulsionForce() : RepulsionForce< DIM >
- RescaleMeshFromBoundaryNode() : MutableMesh< ELEMENT_DIM, SPACE_DIM >
- Reseed() : RandomNumberGenerator
- Reset() : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >, AbstractCellCycleModelOdeSolver, AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >
- reset() : boost::random::exponential_distribution_v165< RealType >, boost::random::gamma_distribution_v165< RealType >, boost::random::normal_distribution_v165< RealType >
- Reset() : CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >, GenericEventHandler< NUM_EVENTS, CONCRETE >, GmshMeshReader< ELEMENT_DIM, SPACE_DIM >, HeartConfig, ImmersedBoundaryMeshReader< ELEMENT_DIM, SPACE_DIM >, PottsMeshReader< SPACE_DIM >, Timer, TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >, VertexMeshReader< ELEMENT_DIM, SPACE_DIM >, VtkMeshReader< ELEMENT_DIM, SPACE_DIM >
- ResetBoundaryConditionsContainer() : AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >, AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ResetCache() : PetscTools
- ResetDirichletCommunication() : AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ResetEndTimeAndNumberOfTimeSteps() : SimulationTime
- ResetFiles() : AbstractFileComparison
- ResetForDivision() : AbstractCellCycleModel, AbstractOdeBasedCellCycleModel, AbstractOdeBasedPhaseBasedCellCycleModel, AbstractOdeSrnModel, AbstractPhaseBasedCellCycleModel, AbstractSimpleCellCycleModel, AbstractSimpleGenerationalCellCycleModel, AbstractSimplePhaseBasedCellCycleModel, AbstractSrnModel, AbstractWntOdeBasedCellCycleModel, Alarcon2004OxygenBasedCellCycleModel, CellSrnModel, DeltaNotchInteriorSrnModel, StochasticOxygenBasedCellCycleModel, StochasticWntCellCycleModel, TysonNovakCellCycleModel
- ResetImpl() : GenericEventHandler< NUM_EVENTS, CONCRETE >
- ResetIndex() : BoundaryElement< ELEMENT_DIM, SPACE_DIM >, Element< ELEMENT_DIM, SPACE_DIM >, MutableElement< ELEMENT_DIM, SPACE_DIM >, MutableElement< 1, SPACE_DIM >
- ResetInterpolatedQuantities() : AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >, AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >, CellBasedEllipticPdeSolver< DIM >, CellBasedParabolicPdeSolver< DIM >, LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ResetKspSolver() : LinearSystem
- ResetMaxCellId() : CellId
- ResetSolver() : AbstractCvodeSystem, CvodeAdaptor
- ResetStatisticsVariables() : FineCoarseMeshPair< DIM >
- ResetStatusCache() : PetscSetupUtils
- ResetTimeStep() : TimeStepper
- ResetToIdentity() : NodeMap, VertexElementMap
- ResetToInitialConditions() : AbstractParameterisedSystem< VECTOR >, AbstractUntemplatedParameterisedSystem
- ResetToNoChangeOfBasisMatrix() : AbstractMaterialLaw< DIM >
- Resize() : NodeMap, ReplicatableVector, VertexElementMap
- ResizeBoxCollection() : NodesOnlyMesh< SPACE_DIM >
- Restore() : DistributedVector
- RevertToOldLocations() : OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
- rGet() : QuadraturePointsGroup< DIM >
- rGet2dVelocityGrids() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- rGetAllCellProperties() : CellPropertyRegistry
- rGetAppliedForce() : Node< SPACE_DIM >, NodeAttributes< SPACE_DIM >
- rGetAttributes() : ElementAttributes< ELEMENT_DIM, SPACE_DIM >, NodeAttributes< SPACE_DIM >
- rGetAvailableSpaces() : CaBasedCellPopulation< DIM >
- rGetBalancingFluidSources() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- rGetBathIdentifiers() : HeartConfig
- rGetBox() : DistributedBoxCollection< DIM >, ObsoleteBoxCollection< DIM >
- rGetCachedVoltages() : PropagationPropertiesCalculator
- rGetCellPopulation() : AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >, AveragedSourceEllipticPde< DIM >, AveragedSourceParabolicPde< DIM >, CellwiseSourceEllipticPde< DIM >, CellwiseSourceParabolicPde< DIM >, WntConcentration< DIM >
- rGetCellPropertyCollection() : Cell
- rGetCells() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- rGetCellsDistributed() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetCentre() : ChasteEllipsoid< SPACE_DIM >
- rGetCentreLocation() : Edge< SPACE_DIM >
- rGetCentreOfSphere() : SphereGeometryBoundaryCondition< DIM >
- rGetCoarseElementsForFineElementCentroids() : FineCoarseMeshPair< DIM >
- rGetCoarseElementsForFineNodes() : FineCoarseMeshPair< DIM >
- rGetConstStateVariables() : AbstractOdeSystem
- rGetContainingBoundaryElementIndices() : Node< SPACE_DIM >
- rGetContainingElementIndices() : Node< SPACE_DIM >
- rGetCornerNodes() : ImmersedBoundaryElement< ELEMENT_DIM, SPACE_DIM >, ImmersedBoundaryElement< 1, SPACE_DIM >
- rGetCurrentSolution() : AbstractContinuumMechanicsSolver< DIM >
- rGetData() : FourthOrderTensor< DIM1, DIM2, DIM3, DIM4 >
- rGetDaughterLocation() : FixedCentreBasedDivisionRule< ELEMENT_DIM, SPACE_DIM >
- rGetDeformedPosition() : AbstractNonlinearElasticitySolver< DIM >, CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM >
- rGetDependentVariableName() : AbstractPdeModifier< DIM >
- rGetDerivedQuantities() : OdeSolution
- rGetDerivedQuantityNames() : AbstractOdeSystemInformation, AbstractUntemplatedParameterisedSystem
- rGetDerivedQuantityUnits() : AbstractOdeSystemInformation, AbstractUntemplatedParameterisedSystem
- rGetDirichletBoundaryConditionsVector() : LinearSystem
- rGetDirichletNodes() : ContinuumMechanicsProblemDefinition< DIM >
- rGetDirichletNodeValues() : ContinuumMechanicsProblemDefinition< DIM >
- rGetDistanceMapEndocardium() : HeartGeometryInformation< SPACE_DIM >
- rGetDistanceMapEpicardium() : HeartGeometryInformation< SPACE_DIM >
- rGetDistanceMapLeftVentricle() : HeartGeometryInformation< SPACE_DIM >
- rGetDistanceMapRightVentricle() : HeartGeometryInformation< SPACE_DIM >
- rGetDivisionBiasVector() : DivisionBiasTrackingModifier< DIM >
- rGetDivisionVector() : FixedVertexBasedDivisionRule< SPACE_DIM >
- rGetDomainSize() : DistributedBoxCollection< DIM >, ObsoleteBoxCollection< DIM >
- rGetEdgeHelper() : VertexMesh< ELEMENT_DIM, SPACE_DIM >
- rGetElementAttributes() : AbstractElement< ELEMENT_DIM, SPACE_DIM >
- rGetElementFluidSources() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- rGetElementParts() : ImmersedBoundaryMeshWriter< ELEMENT_DIM, SPACE_DIM >
- rGetElementsAndWeights() : FineCoarseMeshPair< DIM >
- rGetElementsContained() : Box< DIM >
- rGetElementwiseTractions() : ContinuumMechanicsProblemDefinition< DIM >
- rGetExtracellularConductivityTensor() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >, BidomainTissue< SPACE_DIM >, ExtendedBidomainTissue< SPACE_DIM >
- rGetExtracellularStimulusCacheReplicated() : ExtendedBidomainTissue< SPACE_DIM >
- rGetExtracellularStimulusDistributed() : ExtendedBidomainTissue< SPACE_DIM >
- rGetForceCollection() : OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
- rGetForceVector() : OdeLinearSystemSolver
- rGetGapsDistributed() : ExtendedBidomainTissue< SPACE_DIM >
- rGetGgapCacheReplicated() : ExtendedBidomainTissue< SPACE_DIM >
- rGetGhostNodes() : MeshBasedCellPopulationWithGhostNodes< DIM >
- rGetGlobalLows() : DistributedVectorFactory
- rGetGradient() : CellwiseDataGradient< DIM >
- rGetHaloBox() : DistributedBoxCollection< DIM >
- rGetHaloNodesLeft() : DistributedBoxCollection< DIM >
- rGetHaloNodesRight() : DistributedBoxCollection< DIM >
- rGetHaloNodesToSendLeft() : NodesOnlyMesh< SPACE_DIM >
- rGetHaloNodesToSendRight() : NodesOnlyMesh< SPACE_DIM >
- rGetIfProjectsModified() : ChasteBuildInfo
- rGetIionicCacheReplicated() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetIionicCacheReplicatedSecondCell() : ExtendedBidomainTissue< SPACE_DIM >
- rGetInitiallyOwnedNodes() : NodesOnlyMesh< SPACE_DIM >
- rGetIntracellularConductivityTensor() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetIntracellularConductivityTensorSecondCell() : ExtendedBidomainTissue< SPACE_DIM >
- rGetIntracellularStimulusCacheReplicated() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetIntracellularStimulusCacheReplicatedSecondCell() : ExtendedBidomainTissue< SPACE_DIM >
- rGetLayerForEachNode() : HeartGeometryInformation< SPACE_DIM >
- rGetLength() : Edge< SPACE_DIM >
- rGetLhsMatrix() : LinearSystem, OdeLinearSystemSolver
- rGetLocalBoxes() : DistributedBoxCollection< DIM >, ObsoleteBoxCollection< DIM >
- rGetLocation() : ChastePoint< DIM >, FluidSource< SPACE_DIM >, Node< SPACE_DIM >
- rGetLowerCorner() : ChasteCuboid< SPACE_DIM >
- rGetMesh() : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >, AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, CaBasedCellPopulation< DIM >, ImmersedBoundaryCellPopulation< DIM >, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, NodeBasedCellPopulation< DIM >, PottsBasedCellPopulation< DIM >, VertexBasedCellPopulation< DIM >
- rGetModifiable2dVelocityGrids() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- rGetModifiableForceGrids() : ImmersedBoundary2dArrays< DIM >
- rGetModifiableFourierGrids() : ImmersedBoundary2dArrays< DIM >
- rGetModifiableLocation() : FluidSource< SPACE_DIM >, Node< SPACE_DIM >
- rGetModifiablePressureGrid() : ImmersedBoundary2dArrays< DIM >
- rGetModifiableRightHandSideGrids() : ImmersedBoundary2dArrays< DIM >
- rGetModifiableSourceGradientGrids() : ImmersedBoundary2dArrays< DIM >
- rGetModifiedConductivityTensor() : AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >
- rGetNeighbours() : Node< SPACE_DIM >, NodeAttributes< SPACE_DIM >
- rGetNodeAttributes() : Node< SPACE_DIM >
- rGetNodeLocationsVoronoiDiagram() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- rGetNodePairs() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >, NodeBasedCellPopulation< DIM >
- rGetNodePermutation() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >, AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >, TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
- rGetNodes() : ImmersedBoundaryMesh< ELEMENT_DIM, SPACE_DIM >
- rGetNodesContained() : Box< DIM >
- rGetNodesList() : ChasteNodesList< SPACE_DIM >
- rGetNodesOnEndoSurface() : HeartGeometryInformation< SPACE_DIM >
- rGetNodesOnEpiSurface() : HeartGeometryInformation< SPACE_DIM >
- rGetNodesOnLVSurface() : HeartGeometryInformation< SPACE_DIM >
- rGetNodesOnRVSurface() : HeartGeometryInformation< SPACE_DIM >
- rGetNodesToSendLeft() : NodesOnlyMesh< SPACE_DIM >
- rGetNodesToSendRight() : NodesOnlyMesh< SPACE_DIM >
- rGetNormalToPlane() : PlaneBasedCellKiller< DIM >, PlaneBoundaryCondition< ELEMENT_DIM, SPACE_DIM >
- rGetOperator1() : ImmersedBoundary2dArrays< DIM >
- rGetOperator2() : ImmersedBoundary2dArrays< DIM >
- rGetParameterNames() : AbstractOdeSystemInformation, AbstractUntemplatedParameterisedSystem
- rGetParameters() : OdeSolution
- rGetParameterUnits() : AbstractOdeSystemInformation, AbstractUntemplatedParameterisedSystem
- rGetPdeSolution() : AbstractOdeSystemForCoupledPdeSystem
- rGetPointOnPlane() : PlaneBasedCellKiller< DIM >, PlaneBoundaryCondition< ELEMENT_DIM, SPACE_DIM >
- rGetPrecondMatrix() : LinearSystem
- rGetPressures() : AbstractContinuumMechanicsSolver< DIM >
- rGetProjectVersions() : ChasteBuildInfo
- rGetPurkinjeCellsDistributed() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetPurkinjeIionicCacheReplicated() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetPurkinjeIntracellularStimulusCacheReplicated() : AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- rGetQuadPoint() : GaussianQuadratureRule< ELEMENT_DIM >
- rGetQuadPointToDataAtQuadPointMap() : AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
- rGetRadii() : ChasteEllipsoid< SPACE_DIM >
- rGetRemapInfo() : EdgeOperation
- rGetRemapInfo2() : EdgeOperation
- rGetRhsVector() : LinearSystem
- rGetSecondCellsDistributed() : ExtendedBidomainTissue< SPACE_DIM >
- rGetSin2x() : ImmersedBoundary2dArrays< DIM >
- rGetSin2y() : ImmersedBoundary2dArrays< DIM >
- rGetSolutions() : OdeSolution
- rGetSpatialSolution() : AbstractContinuumMechanicsSolver< DIM >, AbstractNonlinearElasticitySolver< DIM >, StokesFlowSolver< DIM >
- rGetStateVariableNames() : AbstractCardiacCell, AbstractCardiacCellInterface, AbstractCvodeCell, AbstractOdeSystemInformation, AbstractUntemplatedParameterisedSystem
- rGetStateVariables() : AbstractParameterisedSystem< VECTOR >
- rGetStateVariableUnits() : AbstractOdeSystemInformation, AbstractUntemplatedParameterisedSystem
- rGetTimes() : OdeSolution
- rGetTissueIdentifiers() : HeartConfig
- rGetTractionBoundaryElements() : ContinuumMechanicsProblemDefinition< DIM >
- rGetUpperCorner() : ChasteCuboid< SPACE_DIM >
- rGetVelocities() : StokesFlowSolver< DIM >
- rGetVertexBasedPopulationSrn() : VertexBasedCellPopulation< DIM >
- RIGHT_SEPTUM : HeartGeometryInformation< SPACE_DIM >
- RIGHT_SEPTUM_SIZE : HeartGeometryInformation< SPACE_DIM >
- RIGHT_VENTRICLE_SURFACE : HeartGeometryInformation< SPACE_DIM >
- RIGHT_VENTRICLE_WALL : HeartGeometryInformation< SPACE_DIM >
- RKC21IvpOdeSolver() : RKC21IvpOdeSolver
- Rotate() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >, DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RotateX() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- RotateY() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- RotateZ() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- RToF : CorriasBuistICCModified, CorriasBuistSMCModified
- Run() : CardiacSimulation
- RunAndUpdate() : AbstractAlgebraicContractionModel, AbstractContractionModel, AbstractOdeBasedContractionModel, NhsModelWithBackwardSolver
- RunDoNotUpdate() : AbstractAlgebraicContractionModel, AbstractContractionModel, AbstractOdeBasedContractionModel, NhsModelWithBackwardSolver
- RungeKutta2IvpOdeSolver() : RungeKutta2IvpOdeSolver
- RungeKuttaFehlbergIvpOdeSolver() : RungeKuttaFehlbergIvpOdeSolver
- RunToSteadyState() : AbstractSteadyStateRunner
- RunToSteadyStateImplementation() : AbstractSteadyStateRunner, SteadyStateRunner