#include <VertexMeshOperationRecorder.hpp>

Collaboration diagram for VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >:

Public Member Functions
	VertexMeshOperationRecorder ()

	~VertexMeshOperationRecorder ()

void	SetEdgeHelper (EdgeHelper< SPACE_DIM > *pEdgeHelper)

void	RecordT1Swap (T1SwapInfo< SPACE_DIM > &rSwapInfo)

std::vector< T1SwapInfo< SPACE_DIM > >	GetT1SwapsInfo () const

void	ClearT1SwapsInfo ()

void	RecordT2Swap (T2SwapInfo< SPACE_DIM > &rSwapInfo)

std::vector< T2SwapInfo< SPACE_DIM > >	GetT2SwapsInfo () const

void	ClearT2SwapsInfo ()

void	RecordT3Swap (T3SwapInfo< SPACE_DIM > &rSwapInfo)

std::vector< T3SwapInfo< SPACE_DIM > >	GetT3SwapsInfo () const

void	ClearT3SwapsInfo ()

void	RecordCellDivisionInfo (CellDivisionInfo< SPACE_DIM > &rDivisionInfo)

std::vector< CellDivisionInfo< SPACE_DIM > >	GetCellDivisionInfo () const

void	ClearCellDivisionInfo ()

const std::vector< EdgeOperation > &	GetEdgeOperations ()

void	ClearEdgeOperations ()

void	RecordNodeMergeOperation (const std::vector< unsigned > oldIds, VertexElement< ELEMENT_DIM, SPACE_DIM > *pElement, const std::pair< unsigned, unsigned > mergedNodesPair, const bool elementIndexIsRemapped=false)

void	RecordEdgeSplitOperation (VertexElement< ELEMENT_DIM, SPACE_DIM > *pElement, const unsigned edgeIndex, const double insertedNodeRelPosition, const bool elementIndexIsRemapped=false)

void	RecordCellDivideOperation (const std::vector< unsigned > &rOldIds, VertexElement< ELEMENT_DIM, SPACE_DIM > pElement1, VertexElement< ELEMENT_DIM, SPACE_DIM > pElement2)

void	RecordNewEdgeOperation (VertexElement< ELEMENT_DIM, SPACE_DIM > *pElement, const unsigned edgeIndex)

void	RecordEdgeMergeOperation (VertexElement< ELEMENT_DIM, SPACE_DIM > *pElement, const unsigned nodeIndex)

Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)

Private Attributes
std::vector< T1SwapInfo< SPACE_DIM > >	mT1Swaps

std::vector< T2SwapInfo< SPACE_DIM > >	mT2Swaps

std::vector< T3SwapInfo< SPACE_DIM > >	mT3Swaps

std::vector< CellDivisionInfo< SPACE_DIM > >	mCellDivisions

std::vector< EdgeOperation >	mEdgeOperations

EdgeHelper< SPACE_DIM > *	mpEdgeHelper

Friends
class	boost::serialization::access

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >

This class records operations performed on the mesh. In particular, this class records operations on edges and nodes during e.g. T1 transition or cell division.

The sequence of operations as well as their nature are needed for remapping of old (prior to an operation) edge based quantities into new state. For example, when an edge is split into two or, shrinks, the edge quantities may change according to the kind of operation.

Definition at line 64 of file VertexMeshOperationRecorder.hpp.

Constructor & Destructor Documentation

◆ VertexMeshOperationRecorder()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::VertexMeshOperationRecorder ( )

Constructor.

Definition at line 41 of file VertexMeshOperationRecorder.cpp.

◆ ~VertexMeshOperationRecorder()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::~VertexMeshOperationRecorder ( )

Destructor.

Definition at line 47 of file VertexMeshOperationRecorder.cpp.

Member Function Documentation

◆ ClearCellDivisionInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::ClearCellDivisionInfo ( )

Clear information about T3 swaps.

Definition at line 124 of file VertexMeshOperationRecorder.cpp.

◆ ClearEdgeOperations()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::ClearEdgeOperations ( )

Clear edge operations.

Definition at line 136 of file VertexMeshOperationRecorder.cpp.

◆ ClearT1SwapsInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::ClearT1SwapsInfo ( )

Clear information about T1 swaps

Definition at line 70 of file VertexMeshOperationRecorder.cpp.

◆ ClearT2SwapsInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::ClearT2SwapsInfo ( )

Clear information about T1 swaps

Definition at line 88 of file VertexMeshOperationRecorder.cpp.

◆ ClearT3SwapsInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::ClearT3SwapsInfo ( )

Clear information about T3 swaps

Definition at line 106 of file VertexMeshOperationRecorder.cpp.

◆ GetCellDivisionInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::vector< CellDivisionInfo< SPACE_DIM > > VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::GetCellDivisionInfo ( ) const

Returns: Information about cell divisions

Definition at line 118 of file VertexMeshOperationRecorder.cpp.

◆ GetEdgeOperations()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

const std::vector< EdgeOperation > & VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::GetEdgeOperations ( )

Returns: Edge operations since last clearing

Definition at line 130 of file VertexMeshOperationRecorder.cpp.

◆ GetT1SwapsInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::vector< T1SwapInfo< SPACE_DIM > > VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::GetT1SwapsInfo ( ) const

Returns: Information about all T1 swaps

Definition at line 64 of file VertexMeshOperationRecorder.cpp.

◆ GetT2SwapsInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::vector< T2SwapInfo< SPACE_DIM > > VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::GetT2SwapsInfo ( ) const

Returns: Information about T2 swaps

Definition at line 82 of file VertexMeshOperationRecorder.cpp.

◆ GetT3SwapsInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::vector< T3SwapInfo< SPACE_DIM > > VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::GetT3SwapsInfo ( ) const

Returns: Information about T3 swaps

Definition at line 100 of file VertexMeshOperationRecorder.cpp.

◆ RecordCellDivideOperation()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::RecordCellDivideOperation	(	const std::vector< unsigned > &	rOldIds,
		VertexElement< ELEMENT_DIM, SPACE_DIM > *	pElement1,
		VertexElement< ELEMENT_DIM, SPACE_DIM > *	pElement2
	)

Record cell divisions for VertexBasedPopulationSrn class to remap SRNs.

Parameters

rOldIds	Global Edge IDs of parent cell prior cell division
pElement1	Daughter element
pElement2	Daughter element

Definition at line 291 of file VertexMeshOperationRecorder.cpp.

References MutableElement< ELEMENT_DIM, SPACE_DIM >::GetEdge(), AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetIndex(), MutableElement< ELEMENT_DIM, SPACE_DIM >::GetLocalEdgeIndex(), MutableElement< ELEMENT_DIM, SPACE_DIM >::GetNumEdges(), and EdgeRemapInfo::SetSplitProportions().

◆ RecordCellDivisionInfo()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::RecordCellDivisionInfo ( CellDivisionInfo< SPACE_DIM > & rDivisionInfo )

Record cell division event.

Parameters

rDivisionInfo information about a cell division event.

Definition at line 112 of file VertexMeshOperationRecorder.cpp.

◆ RecordEdgeMergeOperation()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::RecordEdgeMergeOperation	(	VertexElement< ELEMENT_DIM, SPACE_DIM > *	pElement,
		const unsigned	nodeIndex
	)

Record merging of adjacent edges due to deletion of the shared node nodeIndex in element pElement

Parameters

pElement	Pointer to element associated with edge merge
nodeIndex	Global index of node

Definition at line 452 of file VertexMeshOperationRecorder.cpp.

References AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetIndex(), and MutableElement< ELEMENT_DIM, SPACE_DIM >::GetNumEdges().

◆ RecordEdgeSplitOperation()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::RecordEdgeSplitOperation	(	VertexElement< ELEMENT_DIM, SPACE_DIM > *	pElement,
		const unsigned	edgeIndex,
		const double	insertedNodeRelPosition,
		const bool	elementIndexIsRemapped = `false`
	)

Record edge split operation in element pElement.

Parameters

pElement	Pointer to element associated with edge split
edgeIndex	index of the edge being split
insertedNodeRelPosition	position of the inserted node relative to the lower index node of the edge
elementIndexIsRemapped	indicates whether the operation has been recorded before element indices have been remapped, e.g. before elements are deleted (defaults to false)

Definition at line 257 of file VertexMeshOperationRecorder.cpp.

References AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetIndex(), MutableElement< ELEMENT_DIM, SPACE_DIM >::GetNumEdges(), and EdgeRemapInfo::SetSplitProportions().

◆ RecordNewEdgeOperation()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::RecordNewEdgeOperation	(	VertexElement< ELEMENT_DIM, SPACE_DIM > *	pElement,
		const unsigned	edgeIndex
	)

Records edge formation

Parameters

pElement
edgeIndex	- new edge index

Definition at line 427 of file VertexMeshOperationRecorder.cpp.

References AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetIndex(), and MutableElement< ELEMENT_DIM, SPACE_DIM >::GetNumEdges().

◆ RecordNodeMergeOperation()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void VertexMeshOperationRecorder< ELEMENT_DIM, SPACE_DIM >::RecordNodeMergeOperation	(	const std::vector< unsigned >	oldIds,
		VertexElement< ELEMENT_DIM, SPACE_DIM > *	pElement,
		const std::pair< unsigned, unsigned >	mergedNodesPair,
		const bool	elementIndexIsRemapped = `false`
	)

Record node merging (or edge shrinkage) event.

Parameters

oldIds	Global Edge IDs prior to node merge
pElement	Pointer to element associated with node merge
mergedNodesPair	the index of the deleted node is stored in the second position
elementIndexIsRemapped	indicates whether the operation has been recorded before element indices have been remapped, e.g. before elements are deleted (defaults to false)

Definition at line 142 of file VertexMeshOperationRecorder.cpp.

References AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetIndex(), MutableElement< ELEMENT_DIM, SPACE_DIM >::GetLocalEdgeIndex(), and MutableElement< ELEMENT_DIM, SPACE_DIM >::GetNumEdges().