Chaste Commit::ca8ccdedf819b6e02855bc0e8e6f50bdecbc5208
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#include <CellCycleModelOdeSolver.hpp>
Public Member Functions | |
bool | IsSetUp () |
void | Initialise () |
void | Reset () |
Public Member Functions inherited from AbstractCellCycleModelOdeSolver | |
AbstractCellCycleModelOdeSolver () | |
virtual | ~AbstractCellCycleModelOdeSolver () |
void | SolveAndUpdateStateVariable (AbstractOdeSystem *pAbstractOdeSystem, double startTime, double endTime, double timeStep) |
bool | StoppingEventOccurred () |
double | GetStoppingTime () |
void | SetSizeOfOdeSystem (unsigned sizeOfOdeSystem) |
unsigned | GetSizeOfOdeSystem () |
void | CheckForStoppingEvents () |
void | SetMaxSteps (long numSteps) |
void | SetTolerances (double relTol=1e-4, double absTol=1e-6) |
virtual bool | IsAdaptive () |
Static Public Member Functions | |
static boost::shared_ptr< CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver > > | Instance () |
Private Member Functions | |
CellCycleModelOdeSolver () | |
template<class Archive > | |
void | serialize (Archive &archive, const unsigned int version) |
Static Private Attributes | |
static boost::shared_ptr< CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver > > | mpInstance |
Friends | |
class | boost::serialization::access |
Additional Inherited Members | |
Protected Attributes inherited from AbstractCellCycleModelOdeSolver | |
boost::shared_ptr< AbstractIvpOdeSolver > | mpOdeSolver |
unsigned | mSizeOfOdeSystem |
Specialization for BackwardEulerIvpOdeSolver, whose constructor requires an argument.
Definition at line 171 of file CellCycleModelOdeSolver.hpp.
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private |
Default constructor. Not user accessible; to obtain an instance of this class use the Instance method.
Definition at line 213 of file CellCycleModelOdeSolver.hpp.
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virtual |
Initialise the ODE solver.
Implements AbstractCellCycleModelOdeSolver.
Definition at line 235 of file CellCycleModelOdeSolver.hpp.
References EXCEPTION, and UNSIGNED_UNSET.
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static |
Definition at line 219 of file CellCycleModelOdeSolver.hpp.
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virtual |
Implements AbstractCellCycleModelOdeSolver.
Definition at line 229 of file CellCycleModelOdeSolver.hpp.
References UNSIGNED_UNSET.
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virtual |
Reset the instance.
Implements AbstractCellCycleModelOdeSolver.
Definition at line 245 of file CellCycleModelOdeSolver.hpp.
References UNSIGNED_UNSET.
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inlineprivate |
Archive the cell-cycle model, never used directly - boost uses this.
archive | the archive |
version | the current version of this class |
Definition at line 189 of file CellCycleModelOdeSolver.hpp.
References CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >::mpInstance.
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friend |
Needed for serialization.
Definition at line 181 of file CellCycleModelOdeSolver.hpp.
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staticprivate |
The single instance of this class, for this ODE_SOLVER.
Definition at line 175 of file CellCycleModelOdeSolver.hpp.