Chaste Commit::ca8ccdedf819b6e02855bc0e8e6f50bdecbc5208
MutableElement.hpp
1/*
2
3Copyright (c) 2005-2024, University of Oxford.
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10This file is part of Chaste.
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15 this list of conditions and the following disclaimer.
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34*/
35#ifndef MUTABLEELEMENT_HPP_
36#define MUTABLEELEMENT_HPP_
37
38#include "AbstractElement.hpp"
39#include "Edge.hpp"
40#include "EdgeHelper.hpp"
41
43#include <boost/serialization/base_object.hpp>
44#include <boost/serialization/vector.hpp>
45
46template<unsigned SPACE_DIM>
47class EdgeHelper;
48
53template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
54class MutableElement : public AbstractElement<ELEMENT_DIM, SPACE_DIM>
55{
56private:
70 template<class Archive>
71 void serialize(Archive & archive, const unsigned int version)
72 {
73 archive & boost::serialization::base_object<AbstractElement<ELEMENT_DIM, SPACE_DIM> >(*this);
74 }
75
76protected:
77
79 std::vector<Edge<SPACE_DIM>*> mEdges;
80
83
84public:
85
92 MutableElement(unsigned index);
93
100 MutableElement(unsigned index,
101 const std::vector<Node<SPACE_DIM>*>& rNodes);
102
103
107 virtual ~MutableElement();
108
114 void RegisterWithNodes();
115
122 void MarkAsDeleted();
123
129 void ResetIndex(unsigned index);
130
137 void UpdateNode(const unsigned& rIndex, Node<SPACE_DIM>* pNode);
138
144 void DeleteNode(const unsigned& rIndex);
145
152 void AddNode(Node<SPACE_DIM>* pNode, const unsigned& rIndex);
153
161 unsigned GetNodeLocalIndex(unsigned globalIndex) const;
162
166 void RegisterWithEdges();
167
171 void RebuildEdges();
172
178 virtual bool IsElementOnBoundary() const;
179
185 void SetEdgeHelper(EdgeHelper<SPACE_DIM>* pEdgeHelper);
186
190 void ClearEdges();
191
195 void BuildEdges();
196
202 unsigned GetEdgeGlobalIndex(unsigned localIndex) const;
203
209 Edge<SPACE_DIM>* GetEdge(unsigned localIndex) const;
210
214 unsigned GetNumEdges() const;
215
221 std::set<unsigned> GetNeighbouringElementAtEdgeIndex(unsigned localIndex);
222
230 bool ContainsEdge(const Edge<SPACE_DIM>* pEdge) const;
231
239 long GetLocalEdgeIndex(const Edge<SPACE_DIM>* pEdge) const;
240};
241
243// Specialization for 1d elements //
244// //
245// 1d elements are just edges (lines) //
247
252template<unsigned SPACE_DIM>
253class MutableElement<1, SPACE_DIM> : public AbstractElement<1,SPACE_DIM>
254{
255protected:
256
258 std::vector<Edge<SPACE_DIM>*> mEdges;
259
262
263public:
264
271 MutableElement(unsigned index, const std::vector<Node<SPACE_DIM>*>& rNodes);
272
279 MutableElement(unsigned index);
280
284 virtual ~MutableElement();
285
292 void UpdateNode(const unsigned& rIndex, Node<SPACE_DIM>* pNode);
293
299 void RegisterWithNodes();
300
307 void MarkAsDeleted();
308
314 void ResetIndex(unsigned index);
315
321 void DeleteNode(const unsigned& rIndex);
322
329 void AddNode(Node<SPACE_DIM>* pNode, const unsigned& rIndex);
330
337 Edge<SPACE_DIM>* GetEdge(unsigned localIndex) const;
338
346 bool ContainsEdge(const Edge<SPACE_DIM>* pEdge) const;
347
351 unsigned GetNumEdges() const;
352
358 void SetEdgeHelper(EdgeHelper<SPACE_DIM>* pEdgeHelper);
359
363 void BuildEdges();
364
368 void ClearEdges();
369
375 unsigned GetEdgeGlobalIndex(unsigned localIndex) const;
376
382 std::set<unsigned> GetNeighbouringElementAtEdgeIndex(unsigned localIndex);
383
391 unsigned GetNodeLocalIndex(unsigned globalIndex) const;
392
396 void RegisterWithEdges();
397
401 void RebuildEdges();
402
408 virtual bool IsElementOnBoundary() const;
409
417 long GetLocalEdgeIndex(const Edge<SPACE_DIM>* pEdge) const;
418};
419
420#endif /*MUTABLEELEMENT_HPP_*/
Definition Edge.hpp:52
std::vector< Edge< SPACE_DIM > * > mEdges
EdgeHelper< SPACE_DIM > * mEdgeHelper
std::vector< Edge< SPACE_DIM > * > mEdges
std::set< unsigned > GetNeighbouringElementAtEdgeIndex(unsigned localIndex)
unsigned GetEdgeGlobalIndex(unsigned localIndex) const
void serialize(Archive &archive, const unsigned int version)
void ResetIndex(unsigned index)
virtual bool IsElementOnBoundary() const
long GetLocalEdgeIndex(const Edge< SPACE_DIM > *pEdge) const
EdgeHelper< SPACE_DIM > * mEdgeHelper
void DeleteNode(const unsigned &rIndex)
virtual ~MutableElement()
bool ContainsEdge(const Edge< SPACE_DIM > *pEdge) const
void UpdateNode(const unsigned &rIndex, Node< SPACE_DIM > *pNode)
friend class boost::serialization::access
Edge< SPACE_DIM > * GetEdge(unsigned localIndex) const
void SetEdgeHelper(EdgeHelper< SPACE_DIM > *pEdgeHelper)
unsigned GetNodeLocalIndex(unsigned globalIndex) const
void AddNode(Node< SPACE_DIM > *pNode, const unsigned &rIndex)
unsigned GetNumEdges() const
Definition Node.hpp:59