Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
TrapezoidEdgeVertexMeshWriter.hpp
1/*
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3Copyright (c) 2005-2024, University of Oxford.
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34*/
35#ifndef TRAPEZOIDEDGEVERTEXMESHWRITER_HPP_
36#define TRAPEZOIDEDGEVERTEXMESHWRITER_HPP_
37
38// Forward declaration prevents circular include chain
39template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
40class VertexMesh;
41
42#ifdef CHASTE_VTK
43// Requires "sudo aptitude install libvtk5-dev" or similar
44#define _BACKWARD_BACKWARD_WARNING_H 1 // Cut out the strstream deprecated warning for now (gcc4.3)
45#include <vtkCellData.h>
46#include <vtkConvexPointSet.h>
47#include <vtkDataCompressor.h>
48#include <vtkDoubleArray.h>
49#include <vtkHexahedron.h>
50#include <vtkPointData.h>
51#include <vtkPolygon.h>
52#include <vtkQuad.h>
53#include <vtkUnstructuredGrid.h>
54#include <vtkUnstructuredGridWriter.h>
55#include <vtkXMLUnstructuredGridWriter.h>
56#endif // CHASTE_VTK
57
58#include "AbstractMeshWriter.hpp"
59#include "NodeMap.hpp"
60#include "VertexMesh.hpp"
61
62// Forward declaration prevents circular include chain
63template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
64class VertexMesh;
65
66template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
68
82template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
83class TrapezoidEdgeVertexMeshWriter : public AbstractMeshWriter<ELEMENT_DIM, SPACE_DIM>
84{
85private:
91
92#ifdef CHASTE_VTK
93 // Requires "sudo apt install libvtk7-dev" or similar
95 vtkUnstructuredGrid* mpVtkUnstructedMesh = nullptr;
96#endif // CHASTE_VTK
97
98public:
106 TrapezoidEdgeVertexMeshWriter(const std::string& rDirectory,
107 const std::string& rBaseName,
108 const bool clearOutputDir = true);
109
116 void WriteVtkUsingMesh(VertexMesh<ELEMENT_DIM, SPACE_DIM>& rMesh, const std::string& stamp = "");
117
125
132 void AddCellData(std::string dataName, std::vector<double> dataPayload);
133
138
139 void WriteFiles();
140};
141
142#endif /*TRAPEZOIDEDGEVERTEXMESHWRITER_HPP_*/
VertexMesh< ELEMENT_DIM, SPACE_DIM > * mpMesh
void MakeVtkMesh(VertexMesh< ELEMENT_DIM, SPACE_DIM > &rMesh)
void WriteVtkUsingMesh(VertexMesh< ELEMENT_DIM, SPACE_DIM > &rMesh, const std::string &stamp="")
void AddCellData(std::string dataName, std::vector< double > dataPayload)