Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
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#include <CellsGenerator.hpp>
Public Member Functions | |
void | GenerateBasic (std::vector< CellPtr > &rCells, unsigned numCells, const std::vector< unsigned > locationIndices=std::vector< unsigned >(), boost::shared_ptr< AbstractCellProperty > pCellProliferativeType=boost::shared_ptr< AbstractCellProperty >()) |
void | GenerateBasicRandom (std::vector< CellPtr > &rCells, unsigned numCells, boost::shared_ptr< AbstractCellProperty > pCellProliferativeType=boost::shared_ptr< AbstractCellProperty >()) |
void | GenerateGivenLocationIndices (std::vector< CellPtr > &rCells, const std::vector< unsigned > locationIndices, boost::shared_ptr< AbstractCellProperty > pCellProliferativeType=boost::shared_ptr< AbstractCellProperty >()) |
A helper class for generating a vector of cells for a given mesh.
It is templated over types of cell-cycle model and spatial dimension.
Definition at line 52 of file CellsGenerator.hpp.
void CellsGenerator< CELL_CYCLE_MODEL, DIM >::GenerateBasic | ( | std::vector< CellPtr > & | rCells, |
unsigned | numCells, | ||
const std::vector< unsigned > | locationIndices = std::vector<unsigned>() , |
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boost::shared_ptr< AbstractCellProperty > | pCellProliferativeType = boost::shared_ptr<AbstractCellProperty>() |
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) |
Fills a vector of cells with a specified cell-cycle model, to match a given number of cells. Gives them birth times of 0 for node 0, -1 for node 1, -2 for node 2 etc...
rCells | An empty vector of cells to fill up. |
numCells | The number of cells to generate. |
locationIndices | is used when a birth-time hint is needed for individual cell. Defaults to an empty vector – otherwise must be of length numCells |
pCellProliferativeType | the cell proliferative type to give each cell (defaults to StemCellProliferativeType) |
Definition at line 98 of file CellsGenerator.hpp.
References EXCEPTION, and CellPropertyRegistry::Instance().
void CellsGenerator< CELL_CYCLE_MODEL, DIM >::GenerateBasicRandom | ( | std::vector< CellPtr > & | rCells, |
unsigned | numCells, | ||
boost::shared_ptr< AbstractCellProperty > | pCellProliferativeType = boost::shared_ptr<AbstractCellProperty>() |
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) |
Fills a vector of cells with a specified cell-cycle model, to match a given number of cells. Gives cells a random birth time drawn uniformly from 0 to the AverageStemCellCycleTime.
rCells | An empty vector of cells to fill up. |
numCells | The number of cells to generate. |
pCellProliferativeType | the cell proliferative type to give each cell (defaults to StemCellProliferativeType) |
Definition at line 149 of file CellsGenerator.hpp.
References CellPropertyRegistry::Instance(), RandomNumberGenerator::Instance(), and RandomNumberGenerator::ranf().
void CellsGenerator< CELL_CYCLE_MODEL, DIM >::GenerateGivenLocationIndices | ( | std::vector< CellPtr > & | rCells, |
const std::vector< unsigned > | locationIndices, | ||
boost::shared_ptr< AbstractCellProperty > | pCellProliferativeType = boost::shared_ptr<AbstractCellProperty>() |
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) |
Fills a vector of cells with birth times to match a given vector of location indices.
rCells | An empty vector of cells to fill up. |
locationIndices | The indices of the cell population to assign real cells to. |
pCellProliferativeType | the cell proliferative type to give each cell (defaults to StemCellProliferativeType) |
Definition at line 188 of file CellsGenerator.hpp.
References CellPropertyRegistry::Clear(), and CellPropertyRegistry::Instance().