Here is a list of all documented class members with links to the class documentation for each member:
- R
: DiFrancescoNoble1985OdeSystem
- radius
: DiFrancescoNoble1985OdeSystem
- randMod()
: RandomNumberGenerator
- RandomCellKiller()
: RandomCellKiller< DIM >
- RandomNumberGenerator()
: RandomNumberGenerator
- ranf()
: RandomNumberGenerator
- rapid_time_dependent_potassium_current_g_Kr
: TenTusscher2006OdeSystem
- rCa
: DiFrancescoNoble1985OdeSystem
- ReadColumnFromFile()
: ColumnDataReader
- ReadFile()
: HeartConfig
- ReadHeaders()
: TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
- ReadNodesPerProcessorFile()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- ReadOrientationMatrixFromFile()
: OrthotropicConductivityTensors< SPACE_DIM >
- ReadOrientationVectorFromFile()
: AxisymmetricConductivityTensors< SPACE_DIM >
- ReadPetscObject()
: PetscTools
- ReadValueFromFile()
: ColumnDataReader
- ReadyToDivide()
: AbstractCellCycleModel
, TissueCell
- ReallocateMemory()
: CellwiseData< DIM >
- ReconstructCylindricalMesh()
: Cylindrical2dMesh
- RefineElement()
: MutableMesh< ELEMENT_DIM, SPACE_DIM >
- RefreshJacobian()
: AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
- RefreshJacobianCachedData()
: NonCachedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RefreshMesh()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterBoundaryElement()
: ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterElement()
: ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterHaloNode()
: ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterNode()
: ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RegisterWithNodes()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
, BoundaryElement< ELEMENT_DIM, SPACE_DIM >
, Element< ELEMENT_DIM, SPACE_DIM >
- RegularStimulus()
: RegularStimulus
- ReIndex()
: MutableMesh< ELEMENT_DIM, SPACE_DIM >
- RelativeConvergenceCriterion
: AbstractUntemplatedConvergenceTester
- ReMesh()
: MutableMesh< ELEMENT_DIM, SPACE_DIM >
, Cylindrical2dMesh
- RemoveBoundaryElement()
: Node< SPACE_DIM >
- RemoveDeadCells()
: AbstractTissue< DIM >
, MeshBasedTissue< DIM >
, NodeBasedTissue< DIM >
- RemoveElement()
: Node< SPACE_DIM >
- RemoveNode()
: NodeBox< DIM >
- RemovePetscContext()
: ReplicatableVector
- ReorderNodes()
: ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- ReplaceNode()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
- ReplicatableVector()
: ReplicatableVector
- Replicate()
: ReplicatableVector
- ReplicateCaches()
: AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
- ReplicateException()
: PetscTools
- ReplicatePetscVector()
: ReplicatableVector
- Report()
: GenericEventHandler< NUM_EVENTS, CONCRETE >
- RescaleMeshFromBoundaryNode()
: MutableMesh< ELEMENT_DIM, SPACE_DIM >
- Reseed()
: RandomNumberGenerator
- Reset()
: Timer
, AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
, AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >
, TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
, TissueConfig
, HeartConfig
, GenericEventHandler< NUM_EVENTS, CONCRETE >
- ResetCache()
: PetscTools
- ResetEndTimeAndNumberOfTimeSteps()
: SimulationTime
- ResetForDivision()
: AbstractCellCycleModel
, AbstractOdeBasedCellCycleModel
, AbstractSimpleCellCycleModel
, AbstractSimpleGenerationBasedCellCycleModel
, AbstractWntOdeBasedCellCycleModel
, SimpleWntCellCycleModel
, StochasticWntCellCycleModel
, TysonNovakCellCycleModel
- ResetIndex()
: BoundaryElement< ELEMENT_DIM, SPACE_DIM >
, Element< ELEMENT_DIM, SPACE_DIM >
- ResetInterpolatedQuantities()
: BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
, MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
, AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ResetMaxCellId()
: TissueCell
- ResetToIdentity()
: NodeMap
- Resize()
: NodeMap
- resize()
: ReplicatableVector
- Restore()
: DistributedVector
- reversal_potentials_P_kna
: TenTusscher2006OdeSystem
- rGetBox()
: NodeBoxCollection< DIM >
- rGetCell()
: VoronoiTessellation< DIM >
- rGetCellA()
: MeshBasedTissue< DIM >::SpringIterator
- rGetCellB()
: MeshBasedTissue< DIM >::SpringIterator
- rGetCells()
: AbstractTissue< DIM >
- rGetCellUsingLocationIndex()
: AbstractTissue< DIM >
- rGetContainingBoundaryElementIndices()
: Node< SPACE_DIM >
- rGetContainingElementIndices()
: Node< SPACE_DIM >
- rGetCurrentSolutionOrGuess()
: AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- rGetDeformedPosition()
: CardiacElectroMechanicsProblem< DIM >
, AbstractNonlinearElasticityAssembler< DIM >
, NonlinearElasticityAssembler< DIM >
- rGetDirichletBoundaryConditionsVector()
: LinearSystem
- rGetDistanceMapEndocardium()
: HeartGeometryInformation< SPACE_DIM >
- rGetDistanceMapEpicardium()
: HeartGeometryInformation< SPACE_DIM >
- rGetDistanceMapLeftVentricle()
: HeartGeometryInformation< SPACE_DIM >
- rGetDistanceMapRightVentricle()
: HeartGeometryInformation< SPACE_DIM >
- rGetExtracellularConductivityTensor()
: BidomainPde< SPACE_DIM >
- rGetFace()
: VoronoiCell
, VoronoiTessellation< DIM >
- rGetForceCollection()
: TissueSimulation< DIM >
- rGetGhostNodes()
: MeshBasedTissueWithGhostNodes< DIM >
- rGetIionicCacheReplicated()
: AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
- rGetIntracellularConductivityTensor()
: AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
- rGetIntracellularStimulusCacheReplicated()
: AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
- rGetLambda()
: ImplicitCardiacMechanicsAssembler< DIM >
- rGetLayerForEachNode()
: HeartGeometryInformation< SPACE_DIM >
- rGetLhsMatrix()
: LinearSystem
- rGetLocation()
: ChastePoint< DIM >
, Node< SPACE_DIM >
- rGetMesh()
: AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
, MeshBasedTissue< DIM >
- rGetMinAndMaxValues()
: NodeBox< DIM >
- rGetModifiableLocation()
: Node< SPACE_DIM >
- rGetMutationState()
: IngeWntSwatCellCycleOdeSystem
, WntCellCycleOdeSystem
- rGetNodePairs()
: NodeBasedTissue< DIM >
- rGetNodePermutation()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- rGetNodes()
: NodeBasedTissue< DIM >
- rGetNodesContained()
: NodeBox< DIM >
- rGetNodesOnEndoSurface()
: HeartGeometryInformation< SPACE_DIM >
- rGetNodesOnEpiSurface()
: HeartGeometryInformation< SPACE_DIM >
- rGetNodesOnLVSurface()
: HeartGeometryInformation< SPACE_DIM >
- rGetNodesOnRVSurface()
: HeartGeometryInformation< SPACE_DIM >
- rGetParameterNames()
: AbstractOdeSystemInformation
, AbstractOdeSystem
- rGetParameterUnits()
: AbstractOdeSystemInformation
, AbstractOdeSystem
- rGetPressures()
: NonlinearElasticityAssembler< DIM >
- rGetQuadPoint()
: GaussianQuadratureRule< ELEM_DIM >
- rGetRhsVector()
: LinearSystem
- rGetSolutions()
: OdeSolution
- rGetStateVariables()
: AbstractOdeSystem
- rGetTimes()
: OdeSolution
- rGetTissue()
: TissueSimulation< DIM >
, CellwiseData< DIM >
- rGetVariableNames()
: AbstractOdeSystem
, AbstractOdeSystemInformation
- rGetVariableUnits()
: AbstractOdeSystemInformation
, AbstractOdeSystem
- rGetVertex()
: Face< DIM >
- rGetVertices()
: Face< DIM >
- rGetVoronoiCellCentre()
: VoronoiCell
- rGetVoronoiTessellation()
: MeshBasedTissue< DIM >
- RIGHT_SEPTUM
: HeartRegionCode
- RIGHT_SEPTUM_SIZE
: HeartGeometryInformation< SPACE_DIM >
- RIGHT_VENTRICLE_SURFACE
: HeartRegionCode
- RIGHT_VENTRICLE_WALL
: HeartRegionCode
- Rotate()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RotateX()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RotateY()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RotateZ()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- RToNF
: DiFrancescoNoble1985OdeSystem
- RungeKutta2IvpOdeSolver()
: RungeKutta2IvpOdeSolver
- RungeKuttaFehlbergIvpOdeSolver()
: RungeKuttaFehlbergIvpOdeSolver
- RunMesherAndReadMesh()
: QuadraticMesh< DIM >