Here is a list of all documented class members with links to the class documentation for each member:
- S_DIM
: BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
, BidomainRhsMatrixAssembler< DIM >
, MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
, SimpleNonlinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM >
, MonodomainRhsMatrixAssembler< ELEM_DIM, SPACE_DIM >
, BidomainWithBathRhsMatrixAssembler< DIM >
, SimpleDg0ParabolicAssembler< ELEMENT_DIM, SPACE_DIM, NON_HEART, CONCRETE >
, SimpleLinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM, CONCRETE >
- Save()
: TissueSimulationArchiver< DIM, SIM >
- save()
: HeartConfig
, RandomNumberGenerator
, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- Scale()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- ScaleAndWrite()
: InventorVoronoiWriter
- ScaleMaterialParameters()
: MooneyRivlinMaterialLaw< DIM >
, PoleZeroMaterialLaw< DIM >
, AbstractIncompressibleMaterialLaw< DIM >
- SchmidCostaExponentialLaw2d()
: SchmidCostaExponentialLaw2d
- SelfType
: BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
, MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
, SimpleDg0ParabolicAssembler< ELEMENT_DIM, SPACE_DIM, NON_HEART, CONCRETE >
, SimpleLinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM, CONCRETE >
, SimpleNonlinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM >
- serialize()
: AbstractStimulusFunction
, FixedDurationGenerationBasedCellCycleModel
, IngeWntSwatCellCycleModel
, MultiStimulus
, SimpleWntCellCycleModel
, StochasticDurationGenerationBasedCellCycleModel
, RegularStimulus
, StochasticWntCellCycleModel
, TysonNovakCellCycleModel
, SimpleStimulus
, WntCellCycleModel
, WntConcentration< DIM >
, ZeroStimulus
, TissueCell
, CellwiseData< DIM >
, DistributedVectorFactory
, AbstractCellKiller< SPACE_DIM >
, RandomCellKiller< DIM >
, LinearSystem
, SloughingCellKiller< DIM >
, AbstractForce< DIM >
, AbstractMesh< ELEMENT_DIM, SPACE_DIM >
, AbstractTwoBodyInteractionForce< DIM >
, GeneralisedLinearSpringForce< DIM >
, MutableMesh< ELEMENT_DIM, SPACE_DIM >
, LinearSpringWithVariableSpringConstantsForce< DIM >
, MeshBasedTissue< DIM >
, NonCachedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, MeshBasedTissueWithGhostNodes< DIM >
, NodeBasedTissue< DIM >
, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, AbstractOdeSystem
, AbstractIvpOdeSolver
, AbstractOneStepIvpOdeSolver
, BackwardEulerIvpOdeSolver
, EulerIvpOdeSolver
, AbstractBackwardEulerCardiacCell< SIZE >
, MockEulerIvpOdeSolver
, RungeKutta2IvpOdeSolver
, AbstractCardiacCell
, RungeKutta4IvpOdeSolver
, RungeKuttaFehlbergIvpOdeSolver
, BackwardEulerFoxModel2002Modified
, SimulationTime
, TissueConfig
, BackwardEulerLuoRudyIModel1991
, Cylindrical2dMesh
, CryptSimulation2d
, LuoRudyIModel1991OdeSystem
, TissueSimulation< DIM >
, AbstractCellCentreBasedTissue< DIM >
, AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
, AbstractTissue< DIM >
, AbstractCellCycleModel
, BidomainPde< SPACE_DIM >
, AbstractOdeBasedCellCycleModel
, AbstractSimpleCellCycleModel
, MonodomainPde< ELEM_DIM, SPACE_DIM >
, AbstractSimpleGenerationBasedCellCycleModel
, AbstractWntOdeBasedCellCycleModel
- Set()
: LogFile
- SetAbsoluteTolerance()
: LinearSystem
- SetActiveTensionInitialGuess()
: NhsSystemWithImplicitSolver
- SetAncestor()
: TissueCell
- SetApdMaps()
: HeartConfig
- SetApoptosisTime()
: TissueConfig
- SetApoptoticSpringCompressionStiffness()
: TissueConfig
- SetApoptoticSprings()
: LinearSpringWithVariableSpringConstantsForce< DIM >
- SetApoptoticSpringTensionStiffness()
: TissueConfig
- SetArchiveDirectory()
: ArchiveLocationInfo
, OutputFileHandler
- SetArchiveLinearSystemObject()
: AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- SetAreaBasedDampingConstant()
: MeshBasedTissue< DIM >
- SetAreaBasedDampingConstantParameter()
: TissueConfig
- SetAsBoundaryNode()
: Node< SPACE_DIM >
- SetAsProduct()
: FourthOrderTensor< DIM >
- SetBathConductivity()
: HeartConfig
- SetBetaCateninSprings()
: LinearSpringWithVariableSpringConstantsForce< DIM >
- SetBetaCatSpringScaler()
: TissueConfig
- SetBirthTime()
: AbstractCellCycleModel
, AbstractOdeBasedCellCycleModel
, TissueCell
- SetBottomCellAncestors()
: MeshBasedTissue< DIM >
- SetBoundaryConditionsContainer()
: AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
, AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- SetCacheReplication()
: AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
- SetCapacitance()
: HeartConfig
- SetCell()
: AbstractCellCycleModel
- SetCellAncestorsToNodeIndices()
: AbstractTissue< DIM >
- SetCellBoundaryAdhesionEnergyParameter()
: TissueConfig
- SetCellCellAdhesionEnergyParameter()
: TissueConfig
- SetCellCentre()
: VoronoiCell
- SetCellCycleModel()
: TissueCell
- SetCellType()
: TissueCell
- SetConductivityHeterogeneities()
: HeartConfig
- SetConstantConductivities()
: AbstractConductivityTensors< SPACE_DIM >
, AxisymmetricConductivityTensors< SPACE_DIM >
- SetConstantDataForTesting()
: CellwiseData< DIM >
- SetConstantWntValueForTesting()
: WntConcentration< DIM >
- SetCoordinate()
: ChastePoint< DIM >
- SetCriticalHypoxicDuration()
: TissueConfig
- SetCryptLength()
: TissueConfig
- SetCryptProjectionParameterA()
: TissueConfig
- SetCryptProjectionParameterB()
: TissueConfig
- SetCryptWidth()
: TissueConfig
- SetDampingConstantMutant()
: TissueConfig
- SetDampingConstantNormal()
: TissueConfig
- SetDefaultIonicModel()
: HeartConfig
- SetDefaultsFile()
: HeartConfig
- SetDeformationEnergyParameter()
: TissueConfig
- SetDeleted()
: NodeMap
- SetDivisionRestingSpringLength()
: TissueConfig
- SetDivisionSeparation()
: TissueConfig
- SetDomain()
: HeartConfig
- SetDt()
: TissueSimulation< DIM >
- SetEdgeBasedSpringConstant()
: LinearSpringWithVariableSpringConstantsForce< DIM >
- SetElectrodes()
: BidomainProblem< DIM >
- SetElementOwnerships()
: AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- SetEndTime()
: TissueSimulation< DIM >
- SetEndTimeAndNumberOfTimeSteps()
: SimulationTime
- SetEpsilonForNumericalJacobian()
: BackwardEulerIvpOdeSolver
- SetExtracellularConductivities()
: HeartConfig
- SetFibreLength()
: HeartConfig
- SetFibreOrientationFile()
: AbstractConductivityTensors< SPACE_DIM >
- SetFixedExtracellularPotentialNodes()
: BidomainProblem< DIM >
, BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
- SetFunctionalBodyForce()
: AbstractNonlinearElasticityAssembler< DIM >
- SetFunctionalTractionBoundaryCondition()
: NonlinearElasticityAssembler< DIM >
- SetG1Duration()
: AbstractSimpleCellCycleModel
, SimpleWntCellCycleModel
, StochasticDurationGenerationBasedCellCycleModel
- SetG2Duration()
: TissueConfig
, StochasticWntCellCycleModel
- SetGeneration()
: AbstractSimpleGenerationBasedCellCycleModel
- SetGhostNodes()
: MeshBasedTissueWithGhostNodes< DIM >
- SetHepaOneCellG1Duration()
: TissueConfig
- SetHepaOneCellHypoxicConcentration()
: TissueConfig
- SetHepaOneCellQuiescentConcentration()
: TissueConfig
- SetHepaOneParameters()
: TissueConfig
- SetIndex()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
, Node< SPACE_DIM >
- SetInitialCondition()
: AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- SetInitialConditions()
: AbstractOdeSystem
, AbstractOdeSystemInformation
- SetInitialConditionsComponent()
: AbstractOdeSystem
, AbstractOdeSystemInformation
- SetInitialConvergenceParameters()
: AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, OdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, OdePdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, PdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, SpaceConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
- SetIntracellularCalciumConcentration()
: NhsCellularMechanicsOdeSystem
- SetIntracellularCalciumConcentrations()
: ImplicitCardiacMechanicsAssembler< DIM >
- SetIntracellularConductivities()
: HeartConfig
- SetIntracellularStimulusFunction()
: AbstractCardiacCell
- SetKSPPreconditioner()
: HeartConfig
- SetKSPSolver()
: HeartConfig
- SetKspType()
: LinearSystem
- SetLambdaAndDerivative()
: NhsCellularMechanicsOdeSystem
- SetLogged()
: TissueCell
- SetMatrixElement()
: LinearSystem
- SetMatrixIsConst()
: AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, AbstractLinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- SetMatrixIsConstant()
: LinearSystem
, AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- SetMatrixIsNotAssembled()
: AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- SetMatrixIsSymmetric()
: LinearSystem
- SetMatrixRow()
: LinearSystem
- SetMatureCellTargetArea()
: TissueConfig
- SetMaxTransitGenerations()
: TissueConfig
- SetMDuration()
: TissueConfig
- SetMechanicsCutOffLength()
: TissueConfig
- SetMembraneSurfaceEnergyParameter()
: TissueConfig
- SetMesh()
: AbstractCardiacCellFactory< ELEM_DIM, SPACE_DIM >
, AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
, AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- SetMeshFileName()
: HeartConfig
- SetMeshFilename()
: ArchiveLocationInfo
- SetMeshPathname()
: ArchiveLocationInfo
- SetMeshWidth()
: AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
- SetMinimumGapDuration()
: TissueConfig
- SetMutantSprings()
: LinearSpringWithVariableSpringConstantsForce< DIM >
- SetMutationState()
: TissueCell
, IngeWntSwatCellCycleOdeSystem
, WntCellCycleOdeSystem
- SetNewIndex()
: NodeMap
- SetNextBoundaryFace()
: AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
- SetNextElement()
: AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
- SetNextNode()
: AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
- SetNoBirth()
: TissueSimulation< DIM >
- SetNode()
: AbstractTissue< DIM >
, MutableMesh< ELEMENT_DIM, SPACE_DIM >
, Cylindrical2dMesh
, MeshBasedTissue< DIM >
, NodeBasedTissue< DIM >
- SetNodeForAverageOfPhiZeroed()
: BidomainProblem< DIM >
- SetNodesPerProcessorFilename()
: AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- SetNoElectricsOutput()
: CardiacElectroMechanicsProblem< DIM >
- SetNonConstantConductivities()
: AbstractConductivityTensors< SPACE_DIM >
- SetNonlinearSolver()
: AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
- SetNullBasis()
: LinearSystem
- SetNumberOfQuadraturePointsPerDimension()
: AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- SetNumberOfTimeSteps()
: OdeSolution
- SetNumNodesAndVars()
: CellwiseData< DIM >
- SetOdePdeAndPrintingTimeSteps()
: HeartConfig
- SetOdeTimeStep()
: HeartConfig
- SetOutputCellAges()
: TissueConfig
- SetOutputCellAncestors()
: TissueConfig
- SetOutputCellAreas()
: TissueConfig
- SetOutputCellCyclePhases()
: TissueConfig
- SetOutputCellIdData()
: TissueConfig
- SetOutputCellMutationStates()
: TissueConfig
- SetOutputCellTypes()
: TissueConfig
- SetOutputCellVariables()
: TissueConfig
- SetOutputDirectory()
: HeartConfig
, TissueSimulation< DIM >
- SetOutputFilenamePrefix()
: HeartConfig
- SetOutputNodes()
: AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- SetOutputTissueAreas()
: TissueConfig
, MeshBasedTissue< DIM >
- SetOutputVoronoiData()
: TissueConfig
, MeshBasedTissue< DIM >
- SetOwnership()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
- SetParameter()
: AbstractOdeSystem
- SetParameters()
: PoleZeroMaterialLaw< DIM >
- SetParametersFile()
: HeartConfig
- SetPcType()
: LinearSystem
- SetPdeTimeStep()
: HeartConfig
- SetPoint()
: Node< SPACE_DIM >
- SetPrecision()
: LogFile
- SetPrintingTimeStep()
: HeartConfig
- SetProteinConcentrationsForTestsOnly()
: AbstractOdeBasedCellCycleModel
- SetRegion()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
, Node< SPACE_DIM >
- SetRelativeTolerance()
: LinearSystem
- SetRhsVectorElement()
: LinearSystem
- SetRowForAverageOfPhiZeroed()
: BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
- SetSamplingTimestepMultiple()
: TissueSimulation< DIM >
- SetScaleFactorGkr()
: Mahajan2008OdeSystem
, TenTusscher2006OdeSystem
- SetScaleFactorGks()
: TenTusscher2006OdeSystem
, Mahajan2008OdeSystem
- SetScaleFactorIto()
: Mahajan2008OdeSystem
, TenTusscher2006OdeSystem
- SetSDuration()
: TissueConfig
- SetSheetDimensions()
: HeartConfig
- SetSimulationDuration()
: HeartConfig
- SetSlabDimensions()
: HeartConfig
- SetSlowValues()
: AbstractCardiacCell
- SetSpaceDimension()
: HeartConfig
- SetSpringStiffness()
: TissueConfig
- SetStartTime()
: SimulationTime
- SetState()
: AbstractCardiacCell
- SetStateVariable()
: AbstractOdeSystem
- SetStateVariables()
: AbstractOdeSystem
- SetStemCellG1Duration()
: TissueConfig
- SetStimulusFunction()
: AbstractCardiacCell
- SetSurfaceAreaToVolumeRatio()
: HeartConfig
- SetSurfaceFiles()
: StreeterFibreGenerator< SPACE_DIM >
- SetSurfaceTractionBoundaryConditions()
: NonlinearElasticityAssembler< DIM >
- SetSymmetricDivisionProbability()
: TissueConfig
- SetTime()
: PdeSimulationTime
- SetTimes()
: AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- SetTissue()
: WntConcentration< DIM >
, CellwiseData< DIM >
- SetTolerance()
: SimpleNewtonNonlinearSolver
- SetTopOfLinearWntConcentration()
: TissueConfig
- SetTransitCellG1Duration()
: TissueConfig
- SetType()
: WntConcentration< DIM >
- setUp()
: AbstractCancerTestSuite
- SetUpdateTissueRule()
: TissueSimulation< DIM >
- SetupMat()
: PetscTools
- SetupSolve()
: TissueSimulation< DIM >
, CryptSimulation2d
- SetUpstrokeTimeMaps()
: HeartConfig
- SetupVectorAndMatrix()
: LinearSystem
- setUpWorld()
: PetscSetup
- SetupWriteBetaCatenin()
: CryptSimulation2d
- SetUseAbsoluteTolerance()
: HeartConfig
- SetUseAnalyticalJacobian()
: AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
- SetUseFixedSchemaLocation()
: HeartConfig
- SetUseRelativeTolerance()
: HeartConfig
- SetValue()
: CellwiseData< DIM >
- SetVertex()
: Face< DIM >
, VertexAndAngle< DIM >
- SetVoltage()
: AbstractCardiacCell
- SetWatchedPosition()
: CardiacElectroMechanicsProblem< DIM >
- SetWntChemotaxisStrength()
: TissueConfig
- SetWntStemThreshold()
: TissueConfig
- SetWntTransitThreshold()
: TissueConfig
- SetWriteInfo()
: AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- SetWriteOutput()
: AbstractNonlinearElasticityAssembler< DIM >
- SetWriteStats()
: SimpleNewtonNonlinearSolver
- Shuffle()
: RandomNumberGenerator
- SimpleDataWriter()
: SimpleDataWriter
- SimpleDg0ParabolicAssembler()
: SimpleDg0ParabolicAssembler< ELEMENT_DIM, SPACE_DIM, NON_HEART, CONCRETE >
- SimpleLinearEllipticAssembler()
: SimpleLinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM, CONCRETE >
- SimpleNewtonNonlinearSolver()
: SimpleNewtonNonlinearSolver
- SimpleNonlinearEllipticAssembler()
: SimpleNonlinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM >
- SimpleStimulus()
: SimpleStimulus
- SimpleWntCellCycleModel()
: SimpleWntCellCycleModel
- SimulateFullActionPotential
: AbstractUntemplatedConvergenceTester
- SimulationTime()
: SimulationTime
- size()
: ReplicatableVector
- Size()
: NodeMap
, QuadraturePointsGroup< DIM >
- SloughingCellKiller()
: SloughingCellKiller< DIM >
- slow_time_dependent_potassium_current_g_Ks
: TenTusscher2006OdeSystem
- SmoothStructureTensors()
: PapillaryFibreCalculator
- sodium_background_current_g_bna
: TenTusscher2006OdeSystem
- sodium_calcium_exchanger_current_alpha
: TenTusscher2006OdeSystem
- sodium_calcium_exchanger_current_gamma
: TenTusscher2006OdeSystem
- sodium_calcium_exchanger_current_K_NaCa
: TenTusscher2006OdeSystem
- sodium_calcium_exchanger_current_K_sat
: TenTusscher2006OdeSystem
- sodium_calcium_exchanger_current_Km_Ca
: TenTusscher2006OdeSystem
- sodium_calcium_exchanger_current_Km_Nai
: TenTusscher2006OdeSystem
- sodium_channel_g_Na
: HodgkinHuxleySquidAxon1952OriginalOdeSystem
- sodium_dynamics_Na_o
: TenTusscher2006OdeSystem
- sodium_potassium_pump_current_K_mk
: TenTusscher2006OdeSystem
- sodium_potassium_pump_current_K_mNa
: TenTusscher2006OdeSystem
- sodium_potassium_pump_current_P_NaK
: TenTusscher2006OdeSystem
- Solve()
: AbstractLinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
, CardiacNewtonSolver< SIZE >
, SimpleNewtonNonlinearSolver
, AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, LinearSystem
, TissueSimulation< DIM >
, AbstractOneStepIvpOdeSolver
, AbstractNonlinearSolver
, ImplicitCardiacMechanicsAssembler< DIM >
, SimplePetscNonlinearSolver
, AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
, CardiacElectroMechanicsProblem< DIM >
, AbstractCardiacProblem< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
, AbstractIvpOdeSolver
, SimpleDg0ParabolicAssembler< ELEMENT_DIM, SPACE_DIM, NON_HEART, CONCRETE >
, AbstractIvpOdeSolver
, AbstractNonlinearElasticityAssembler< DIM >
, RungeKuttaFehlbergIvpOdeSolver
, AbstractOneStepIvpOdeSolver
- SolveAndUpdateStateVariable()
: AbstractIvpOdeSolver
- SolveBoundaryElementMapping()
: AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- SolveCellSystems()
: AbstractCardiacPde< ELEM_DIM, SPACE_DIM >
- SolveDoNotUpdate()
: NhsSystemWithImplicitSolver
- SolveElementMapping()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- SolveHaloNodeMapping()
: ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- SolveLinearSystem()
: CardiacNewtonSolver< SIZE >
, BackwardEulerIvpOdeSolver
- SolveNodeMapping()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
, AbstractMesh< ELEMENT_DIM, SPACE_DIM >
, ParallelTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- SolveOdeToTime()
: WntCellCycleModel
, AbstractOdeBasedCellCycleModel
, IngeWntSwatCellCycleModel
, TysonNovakCellCycleModel
- SPACING
: ColumnDataWriter
, ColumnDataReader
- SplitUpIntoBoxes()
: NodeBasedTissue< DIM >
- SpringIterator()
: MeshBasedTissue< DIM >::SpringIterator
- SpringsBegin()
: MeshBasedTissue< DIM >
- SpringsEnd()
: MeshBasedTissue< DIM >
- StandardNormalRandomDeviate()
: RandomNumberGenerator
- StartApoptosis()
: TissueCell
- StartTime
: Timer
- StaticSolve()
: AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
, AbstractLinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
, AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- STENCIL_SIZE
: NonlinearElasticityAssembler< DIM >
, ImplicitCardiacMechanicsAssembler< DIM >
- Stimulus
: AbstractUntemplatedConvergenceTester
- StimulusBoundaryCondition()
: StimulusBoundaryCondition< SPACE_DIM >
- StochasticDurationGenerationBasedCellCycleModel()
: StochasticDurationGenerationBasedCellCycleModel
- StochasticWntCellCycleModel()
: StochasticWntCellCycleModel
- StoppingEventHasOccurred()
: TissueSimulation< DIM >
- StoppingEventOccurred()
: AbstractIvpOdeSolver
- StreeterFibreGenerator()
: StreeterFibreGenerator< SPACE_DIM >
- Stripe()
: DistributedVector::Stripe
- subsystemInformation
: CombinedOdeSystemInformation::InstancePointers
- SurfaceBasisFunction
: AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- SwitchOff()
: Electrodes< DIM >