Here is a list of all documented class members with links to the class documentation for each member:
- GaussianQuadratureRule()
: GaussianQuadratureRule< ELEM_DIM >
- GeneralisedLinearSpringForce()
: GeneralisedLinearSpringForce< DIM >
- GenerateBasic()
: FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >
- GenerateCellResults()
: AbstractTissue< DIM >
- GenerateForCrypt()
: AbstractCellsGenerator< DIM >
- GenerateGivenLocationIndices()
: FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >
- GenerateVectorsOfElementsStraddlingPeriodicBoundaries()
: Cylindrical2dMesh
- Get()
: QuadraturePointsGroup< DIM >
- GetActionPotentialAmplitudes()
: CellProperties
- GetActiveTension()
: NhsCellularMechanicsOdeSystem
- GetActiveTensionAtNextTime()
: NhsSystemWithImplicitSolver
- GetAge()
: AbstractCellCycleModel
, TissueCell
- GetAllActionPotentialDurations()
: CellProperties
- GetAncestor()
: TissueCell
- GetApoptosisTime()
: CancerParameters
- GetApoptoticSpringCompressionStiffness()
: CancerParameters
- GetApoptoticSpringTensionStiffness()
: CancerParameters
- GetArchivePathname()
: TissueSimulationArchiver< DIM, SIM >
- GetAreaBasedDampingConstantParameter()
: CancerParameters
- GetBetaCatSpringScaler()
: CancerParameters
- GetBidomainPde()
: BidomainProblem< DIM >
- GetBirthTime()
: AbstractCellCycleModel
, TissueCell
- GetBoundaryConditionsContainer()
: Electrodes< DIM >
- GetCalciumTroponinValue()
: NhsCellularMechanicsOdeSystem
- GetCardiacCell()
: AbstractCardiacPde< SPACE_DIM >
- GetCell()
: AbstractCellCycleModel
- GetCellAncestors()
: AbstractTissue< DIM >
- GetCellBoundaryAdhesionEnergyParameter()
: CancerParameters
- GetCellCellAdhesionEnergyParameter()
: CancerParameters
- GetCellCycleModel()
: TissueCell
- GetCellCyclePhaseCount()
: AbstractTissue< DIM >
, TissueSimulation< DIM >
- GetCellLocationIndices()
: HoneycombMeshGenerator
- GetCellMutationStateCount()
: AbstractTissue< DIM >
, TissueSimulation< DIM >
- GetCellType()
: TissueCell
- GetCellTypeCount()
: AbstractTissue< DIM >
, TissueSimulation< DIM >
- GetChasteTestOutputDirectory()
: OutputFileHandler
- GetCircularMesh()
: HoneycombMeshGenerator
- GetCorrespondingNodeIndex()
: Cylindrical2dMesh
- GetCpuTime()
: GenericEventHandler< NUM_EVENTS, CONCRETE >
- GetCriticalHypoxicDuration()
: CancerParameters
- GetCryptLength()
: CancerParameters
- GetCryptProjectionParameterA()
: CancerParameters
- GetCryptProjectionParameterB()
: CancerParameters
- GetCryptSection()
: CryptStatistics
- GetCryptSectionPeriodic()
: CryptStatistics
- GetCryptWidth()
: CancerParameters
- GetCurrentCellCyclePhase()
: AbstractCellCycleModel
- GetCurrentSolutionOrGuessValue()
: AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- GetCutoffPoint()
: AbstractTwoBodyInteractionForce< DIM >
- GetCycleLengths()
: CellProperties
- GetCylindricalMesh()
: HoneycombMeshGenerator
- GetCytoplasmicBetaCateninLevel()
: IngeWntSwatCellCycleModel
- GetDampingConstant()
: AbstractCellCentreBasedTissue< DIM >
, AbstractTissue< DIM >
, MeshBasedTissue< DIM >
- GetDampingConstantMutant()
: CancerParameters
- GetDampingConstantNormal()
: CancerParameters
- GetDeathProbability()
: RandomCellKiller< SPACE_DIM >
- GetDeformationEnergyParameter()
: CancerParameters
- GetDivisionRestingSpringLength()
: CancerParameters
- GetDivisionSeparation()
: CancerParameters
- GetDt()
: TissueSimulation< DIM >
- GetElapsedTime()
: GenericEventHandler< NUM_EVENTS, CONCRETE >
- GetG1Duration()
: AbstractCellCycleModel
- GetG2Duration()
: CancerParameters
, AbstractCellCycleModel
, StochasticWntCellCycleModel
, TysonNovakCellCycleModel
- GetGeneration()
: AbstractSimpleGenerationBasedCellCycleModel
- GetGhostNodeIndices()
: MeshBasedTissueWithGhostNodes< DIM >
- GetHepaOneCellG1Duration()
: CancerParameters
- GetHepaOneCellHypoxicConcentration()
: CancerParameters
- GetHepaOneCellQuiescentConcentration()
: CancerParameters
- GetHypothesis()
: IngeWntSwatCellCycleModel
- GetIIonic()
: AbstractCardiacCell
, BackwardEulerFoxModel2002Modified
, BackwardEulerLuoRudyIModel1991
, DiFrancescoNoble1985OdeSystem
, FakeBathCell
, FitzHughNagumo1961OdeSystem
, FoxModel2002Modified
, HodgkinHuxleySquidAxon1952OriginalOdeSystem
, LuoRudyIModel1991OdeSystem
, TenTusscher2006OdeSystem
- GetIndex()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
- GetInitialConditions()
: AbstractOdeSystemInformation
- GetIntegrand()
: AbstractFunctionalCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- GetIntracellularCalciumConcentration()
: AbstractCardiacCell
, BackwardEulerLuoRudyIModel1991
, LuoRudyIModel1991OdeSystem
- GetLambda()
: NhsCellularMechanicsOdeSystem
- GetLastActionPotentialDuration()
: CellProperties
- GetLastMaxUpstrokeVelocity()
: CellProperties
- GetLinearSystem()
: AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
- GetLocationIndexUsingCell()
: AbstractTissue< DIM >
- GetLocationOfCellCentre()
: AbstractCellCentreBasedTissue< DIM >
, AbstractTissue< DIM >
- GetMatrix()
: BidomainRhsMatrixAssembler< DIM >
, BidomainWithBathRhsMatrixAssembler< DIM >
, MonodomainRhsMatrixAssembler< DIM >
- GetMatrixElement()
: LinearSystem
- GetMatureCellTargetArea()
: CancerParameters
- GetMaxNodeIndex()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetMaxTransitGenerations()
: CancerParameters
- GetMaxUpstrokeVelocities()
: CellProperties
- GetMDuration()
: CancerParameters
, AbstractCellCycleModel
, TysonNovakCellCycleModel
- GetMembraneBoundBetaCateninLevel()
: IngeWntSwatCellCycleModel
- GetMembraneSurfaceEnergyParameter()
: CancerParameters
- GetMesh()
: HoneycombMeshGenerator
- GetMessage()
: Exception
- GetMinimumGapDuration()
: CancerParameters
- GetMinNodeIndex()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetMutationState()
: TissueCell
- GetMyRank()
: PetscTools
- GetNeumannBCValue()
: BoundaryConditionsContainer< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- GetNextEdgeData()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetNextElementData()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetNextFaceData()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetNextNode()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetNode()
: AbstractTissue< DIM >
, MeshBasedTissue< DIM >
, NodeBasedTissue< DIM >
- GetNodeA()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
, MeshBasedTissue< DIM >::SpringIterator
- GetNodeB()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
, MeshBasedTissue< DIM >::SpringIterator
- GetNodeCorrespondingToCell()
: AbstractCellCentreBasedTissue< DIM >
- GetNodeLocation()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
, TissueSimulation< DIM >
- GetNodesByComponentValue()
: NonlinearElasticityTools< DIM >
- GetNuclearBetaCateninLevel()
: IngeWntSwatCellCycleModel
- GetNumBirths()
: TissueSimulation< DIM >
- GetNumDeaths()
: TissueSimulation< DIM >
- GetNumEdges()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetNumElements()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
, QuadraturePointsGroup< DIM >
- GetNumFaces()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetNumNodes()
: NodeBasedTissue< DIM >
, AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
, AbstractTissue< DIM >
, MeshBasedTissue< DIM >
- GetNumQuadPoints()
: GaussianQuadratureRule< ELEM_DIM >
- GetNumQuadPointsPerElement()
: QuadraturePointsGroup< DIM >
- GetNumRealCells()
: AbstractTissue< DIM >
- GetNumSlowValues()
: AbstractCardiacCell
- GetOdeStopTime()
: AbstractOdeBasedCellCycleModel
, AbstractWntOdeBasedCellCycleModel
, TysonNovakCellCycleModel
- GetOutputDirectory()
: TissueSimulation< DIM >
- GetOutputDirectoryFullPath()
: OutputFileHandler
- GetOwnershipRange()
: LinearSystem
- GetPeakPotentials()
: CellProperties
- GetProblemSize()
: DistributedVector
- GetProteinConcentrations()
: AbstractOdeBasedCellCycleModel
- GetQuadratureRule()
: ImplicitCardiacMechanicsAssembler< DIM >
- GetRadiusVectorForOneElement()
: PapillaryFibreCalculator
- GetRadiusVectors()
: PapillaryFibreCalculator
- GetRawDataFromFile()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- GetRestingPotentials()
: CellProperties
- GetRhsVectorElement()
: LinearSystem
- GetSDuration()
: TysonNovakCellCycleModel
, AbstractCellCycleModel
, CancerParameters
- GetSG2MDuration()
: CancerParameters
- GetSloughSides()
: SloughingCellKiller
- GetSlowValues()
: AbstractCardiacCell
- GetSolution()
: AbstractCardiacProblem< SPACE_DIM, PROBLEM_DIM >
- GetSpringStiffness()
: CancerParameters
- GetStateVariableNumberByName()
: AbstractOdeSystemInformation
, AbstractOdeSystem
- GetStateVariableUnitsByNumber()
: AbstractOdeSystem
, AbstractOdeSystemInformation
- GetStateVariableValueByNumber()
: AbstractOdeSystem
- GetStemCellG1Duration()
: CancerParameters
- GetStiffnessMatrixGlobalIndices()
: AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
- GetStimulus()
: MultiStimulus
, RegularStimulus
, SimpleStimulus
, ZeroStimulus
, AbstractStimulusFunction
- GetSymmetricDivisionProbability()
: CancerParameters
- GetTime()
: SimulationTime
- GetTimeAtLastMaxUpstrokeVelocity()
: CellProperties
- GetTimesAtMaxUpstrokeVelocity()
: CellProperties
- GetTimeStep()
: SimulationTime
- GetTimeStepsElapsed()
: SimulationTime
- GetTissue()
: AbstractCellKiller< SPACE_DIM >
- GetTopOfLinearWntConcentration()
: CancerParameters
- GetTotalNumberOfTimeSteps()
: SimulationTime
- GetTotalNumQuadPoints()
: ImplicitCardiacMechanicsAssembler< DIM >
- GetTransitCellG1Duration()
: CancerParameters
- GetType()
: WntConcentration
- GetTypicalStemCellCycleTime()
: SimpleWntCellCycleModelCellsGenerator< DIM >
, StochasticWntCellCycleModelCellsGenerator< DIM >
, FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >
, TysonNovakCellCycleModelCellsGenerator< DIM >
, WntCellCycleModelCellsGenerator< DIM >
, IngeWntSwatCellCycleModelCellsGenerator< DIM >
, AbstractCellsGenerator< DIM >
, StochasticDurationGenerationBasedCellCycleModelCellsGenerator< DIM >
- GetTypicalTransitCellCycleTime()
: TysonNovakCellCycleModelCellsGenerator< DIM >
, StochasticDurationGenerationBasedCellCycleModelCellsGenerator< DIM >
, IngeWntSwatCellCycleModelCellsGenerator< DIM >
, AbstractCellsGenerator< DIM >
, SimpleWntCellCycleModelCellsGenerator< DIM >
, FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >
, StochasticWntCellCycleModelCellsGenerator< DIM >
, WntCellCycleModelCellsGenerator< DIM >
- GetValue()
: ConstBoundaryCondition< SPACE_DIM >
, StimulusBoundaryCondition< SPACE_DIM >
, AbstractBoundaryCondition< SPACE_DIM >
, FunctionalBoundaryCondition< SPACE_DIM >
, CellwiseData< DIM >
- GetVectorFromAtoB()
: Cylindrical2dMesh
- GetVolume()
: AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
- GetWeight()
: GaussianQuadratureRule< ELEM_DIM >
- GetWhetherCryptSectionCellsAreLabelled()
: AbstractCryptStatistics
- GetWidth()
: Cylindrical2dMesh
- GetWntChemotaxisStrength()
: CancerParameters
- GetWntGradient()
: WntConcentration
- GetWntLevel()
: WntConcentration
- GetWntStemThreshold()
: CancerParameters
- GetWntTransitThreshold()
: CancerParameters
- GetWriteTissueAreas()
: MeshBasedTissue< DIM >
- GetWriteVoronoiData()
: MeshBasedTissue< DIM >
- GetZeroStrainPressure()
: AbstractIsotropicIncompressibleMaterialLaw< DIM >
, PoleZeroMaterialLaw< DIM >
, AbstractIsotropicIncompressibleMaterialLaw< DIM >
, SchmidCostaExponentialLaw2d
, AbstractIncompressibleMaterialLaw< DIM >
- Global
: DistributedVector::Iterator