- o -

• ObjectCommunicator() : ObjectCommunicator< CLASS >
• OdeLinearSystemSolver() : OdeLinearSystemSolver
• OdeSolution() : OdeSolution
• OdeSystemForCoupledHeatEquation() : OdeSystemForCoupledHeatEquation
• OdeSystemForCoupledHeatEquationWithSource() : OdeSystemForCoupledHeatEquationWithSource
• OdeSystemInformation() : OdeSystemInformation< ODE_SYSTEM >
• OffLatticeSimulation() : OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
• OnEndOfTimestep() : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , BidomainProblem< DIM >
• OnEndOfTimeStep() : CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM >
• OnLatticeSimulation() : OnLatticeSimulation< DIM >
• OpenCableElementsFile() : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
• OpenElementFile() : MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >
• OpenElementFiles() : CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >
• OpenElementsFile() : PottsMeshReader< SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
• OpenFaceFile() : MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >
• OpenFacesFile() : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
• OpenFile() : Hdf5DataWriter
• OpenFileAndWriteHeader() : FibreWriter< DIM >
• OpenFiles() : GmshMeshReader< ELEMENT_DIM, SPACE_DIM > , PottsMeshReader< SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
• OpenNclFile() : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
• OpenNodeFile() : CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM > , MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM > , PottsMeshReader< SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
• OpenOutputFile() : AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM > , OutputFileHandler
• OpenOutputFileForAppend() : AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM >
• OpenResultsFiles() : CellBasedPdeHandler< DIM >
• OpenRoundRobinWritersFilesForAppend() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
• OpenWritersFiles() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > , CaBasedCellPopulation< DIM > , MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > , MeshBasedCellPopulationWithGhostNodes< DIM > , PottsBasedCellPopulation< DIM > , VertexBasedCellPopulation< SPACE_DIM >
• operator!=() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator , AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , DistributedVector::Iterator , MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >::SpringIterator , Node< SPACE_DIM >::ContainingBoundaryElementIterator , Node< SPACE_DIM >::ContainingElementIterator , PottsMesh< DIM >::PottsElementIterator , TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• operator()() : boost::random::normal_distribution_v156< RealType > , FourthOrderTensor< DIM1, DIM2, DIM3, DIM4 > , LessThanNode< SPACE_DIM > , null_deleter
• operator*() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator , AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , Node< SPACE_DIM >::ContainingBoundaryElementIterator , Node< SPACE_DIM >::ContainingElementIterator , PottsMesh< DIM >::PottsElementIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• operator++() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator , AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , DistributedVector::Iterator , MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >::SpringIterator , Node< SPACE_DIM >::ContainingBoundaryElementIterator , Node< SPACE_DIM >::ContainingElementIterator , PottsMesh< DIM >::PottsElementIterator , TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• operator->() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator , AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , PottsMesh< DIM >::PottsElementIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• operator<<() : LogFile
• operator=() : CardiacNewtonSolver< SIZE, CELLTYPE > , CellPropertyRegistry , CombinedOdeSystemInformation , HeartRegionCode , OdeSystemInformation< ODE_SYSTEM >
• operator==() : Node< SPACE_DIM >::ContainingBoundaryElementIterator , Node< SPACE_DIM >::ContainingElementIterator
• operator[]() : AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM > , ChastePoint< DIM > , ChastePoint< 0 > , DistributedVector::Chunk , DistributedVector , DistributedVector::Stripe , ReplicatableVector
• OperatorSplittingMonodomainSolver() : OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM >
• OptionExists() : CommandLineArguments
• OutputAdditionalSimulationSetup() : AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > , OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > , OnLatticeSimulation< DIM >
• OutputCellCaBasedDivisionRuleInfo() : AbstractCaBasedDivisionRule< DIM >
• OutputCellCaBasedDivisionRuleParameters() : AbstractCaBasedDivisionRule< DIM >
• OutputCellCycleModelInfo() : AbstractCellCycleModel
• OutputCellCycleModelParameters() : AbstractCellCycleModel , AbstractOdeBasedCellCycleModel , AbstractSimpleCellCycleModel , AbstractSimpleGenerationBasedCellCycleModel , AbstractVanLeeuwen2009WntSwatCellCycleModel , AbstractWntOdeBasedCellCycleModel , Alarcon2004OxygenBasedCellCycleModel , ContactInhibitionCellCycleModel , ExponentiallyDistributedStochasticDurationGenerationBasedCellCycleModel , FixedDurationGenerationBasedCellCycleModel , GammaDistributedStochasticDurationCellCycleModel , SimpleOxygenBasedCellCycleModel , SimpleWntCellCycleModel , SingleOdeWntCellCycleModel , StochasticDurationCellCycleModel , StochasticDurationGenerationBasedCellCycleModel , StochasticOxygenBasedCellCycleModel , StochasticWntCellCycleModel , TysonNovakCellCycleModel , VanLeeuwen2009WntSwatCellCycleModelHypothesisOne , VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo , WntCellCycleModel
• OutputCellKillerInfo() : AbstractCellKiller< SPACE_DIM >
• OutputCellKillerParameters() : AbstractCellKiller< SPACE_DIM > , ApoptoticCellKiller< SPACE_DIM > , IsolatedLabelledCellKiller< DIM > , PlaneBasedCellKiller< DIM > , RadialSloughingCellKiller , RandomCellKiller< DIM > , SloughingCellKiller< DIM > , T2SwapCellKiller< DIM > , TargetedCellKiller< DIM >
• OutputCellPopulationBoundaryConditionInfo() : AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM >
• OutputCellPopulationBoundaryConditionParameters() : AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM > , CryptSimulationBoundaryCondition< DIM > , PlaneBoundaryCondition< ELEMENT_DIM, SPACE_DIM > , SphereGeometryBoundaryCondition< DIM >
• OutputCellPopulationInfo() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
• OutputCellPopulationParameters() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > , AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > , AbstractOffLatticeCellPopulation< ELEMENT_DIM, SPACE_DIM > , AbstractOnLatticeCellPopulation< DIM > , CaBasedCellPopulation< DIM > , MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > , MeshBasedCellPopulationWithGhostNodes< DIM > , NodeBasedCellPopulation< DIM > , NodeBasedCellPopulationWithBuskeUpdate< DIM > , NodeBasedCellPopulationWithParticles< DIM > , PottsBasedCellPopulation< DIM > , VertexBasedCellPopulation< SPACE_DIM >
• OutputCellVertexBasedDivisionRuleInfo() : AbstractVertexBasedDivisionRule< SPACE_DIM >
• OutputCellVertexBasedDivisionRuleParameters() : AbstractVertexBasedDivisionRule< SPACE_DIM >
• OutputDirectoryFifoQueue() : OutputDirectoryFifoQueue
• OutputFileHandler() : OutputFileHandler
• OutputForceInfo() : AbstractForce< ELEMENT_DIM, SPACE_DIM >
• OutputForceParameters() : AbstractForce< ELEMENT_DIM, SPACE_DIM > , AbstractTwoBodyInteractionForce< ELEMENT_DIM, SPACE_DIM > , BuskeAdhesiveForce< DIM > , BuskeCompressionForce< DIM > , BuskeElasticForce< DIM > , ChemotacticForce< DIM > , CryptProjectionForce , DifferentialAdhesionGeneralisedLinearSpringForce< ELEMENT_DIM, SPACE_DIM > , DiffusionForce< DIM > , FarhadifarForce< DIM > , GeneralisedLinearSpringForce< ELEMENT_DIM, SPACE_DIM > , LinearSpringWithVariableSpringConstantsForce< DIM > , NagaiHondaDifferentialAdhesionForce< DIM > , NagaiHondaForce< DIM > , RepulsionForce< DIM > , VertexCryptBoundaryForce< DIM > , WelikyOsterForce< DIM >
• OutputMeshAsVtkUnstructuredGrid() : VtkMeshReader< ELEMENT_DIM, SPACE_DIM >
• OutputParameters() : CellBasedPdeHandler< DIM > , CellBasedPdeHandlerOnCuboid< DIM >
• OutputSimulationModifierInfo() : AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM >
• OutputSimulationModifierParameters() : AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM > , AbstractTargetAreaModifier< DIM > , DeltaNotchTrackingModifier< DIM > , FarhadifarTypeModifier< DIM > , SimpleTargetAreaModifier< DIM > , VolumeTrackingModifier< DIM >
• OutputSimulationParameters() : AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > , CryptSimulation1d , CryptSimulation2d , OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > , OnLatticeSimulation< DIM >
• OutputSimulationSetup() : AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
• OutputSrnModelInfo() : AbstractSrnModel
• OutputSrnModelParameters() : AbstractOdeSrnModel , AbstractSrnModel , DeltaNotchSrnModel , Goldbeter1991SrnModel
• OutputSwitchingUpdateRuleParameters() : AbstractCaSwitchingUpdateRule< DIM > , RandomCaSwitchingUpdateRule< DIM >
• OutputUpdateRuleInfo() : AbstractCaSwitchingUpdateRule< DIM > , AbstractCaUpdateRule< DIM > , AbstractPottsUpdateRule< DIM >
• OutputUpdateRuleParameters() : AbstractCaUpdateRule< DIM > , AbstractPottsUpdateRule< DIM > , AdhesionPottsUpdateRule< DIM > , ChemotaxisPottsUpdateRule< DIM > , DifferentialAdhesionPottsUpdateRule< DIM > , DiffusionCaUpdateRule< DIM > , SurfaceAreaConstraintPottsUpdateRule< DIM > , VolumeConstraintPottsUpdateRule< DIM >