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• IdentifySwapType() : MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
• IgnoreBlankLines() : FileComparison
• IgnoreLinesContaining() : FileComparison
• ImplicitCardiacMechanicsSolver() : ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
• ImplicitSolveForQ() : NhsModelWithBackwardSolver
• ImportFromMesher() : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
• ImposeBoundaryCondition() : AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM > , CryptSimulationBoundaryCondition< DIM > , PlaneBoundaryCondition< ELEMENT_DIM, SPACE_DIM > , SphereGeometryBoundaryCondition< DIM >
• IncludesPoint() : Element< ELEMENT_DIM, SPACE_DIM >
• IncompressibleNonlinearElasticitySolver() : IncompressibleNonlinearElasticitySolver< DIM >
• increment() : AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::ElementIterator , AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::NodeIterator
• IncrementCellCount() : AbstractCellProperty
• IncrementInterpolatedGradientQuantities() : AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
• IncrementInterpolatedQuantities() : AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM > , AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > , CellBasedPdeSolver< DIM > , LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• IncrementTimeOneStep() : SimulationTime
• Init() : AbstractCardiacCell , AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM > , AbstractCvodeSystem , Alarcon2004OxygenBasedCellCycleOdeSystem , AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM > , Mirams2010WntOdeSystem , OrthotropicConductivityTensors< ELEMENT_DIM, SPACE_DIM > , TysonNovak2001OdeSystem , VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
• Initialise() : AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > , AbstractCardiacMechanicsSolverInterface< DIM > , AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , AbstractCellCycleModel , AbstractCellCycleModelOdeSolver , AbstractOdeSrnModel , AbstractOdeSystemInformation , AbstractSimpleCellCycleModel , AbstractSrnModel , AbstractVanLeeuwen2009WntSwatCellCycleModel , Alarcon2004OxygenBasedCellCycleModel , CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM > , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER > , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver > , CellwiseOdeSystemInformation< ODE_SYSTEM > , CombinedOdeSystemInformation , DeltaNotchSrnModel , Goldbeter1991SrnModel , OdeSystemInformation< ODE_SYSTEM > , SingleOdeWntCellCycleModel , StochasticOxygenBasedCellCycleModel , StochasticWntCellCycleModel , TysonNovakCellCycleModel , WntCellCycleModel
• InitialiseAtStart() : AbstractOutputModifier , ActivationOutputModifier , SingleTraceOutputModifier
• InitialiseCellCycleModel() : Cell
• InitialiseCellPdeElementMap() : CellBasedPdeHandler< DIM >
• InitialiseCells() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
• InitialiseDaughterCell() : AbstractCellCycleModel , AbstractSimpleCellCycleModel , AbstractSimpleGenerationBasedCellCycleModel , AbstractSrnModel , SimpleWntCellCycleModel , StochasticOxygenBasedCellCycleModel , StochasticWntCellCycleModel , TysonNovakCellCycleModel
• InitialiseForSolve() : AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM > , AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM > , AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , BidomainSolver< ELEMENT_DIM, SPACE_DIM > , CellBasedPdeSolver< DIM > , ExtendedBidomainSolver< ELEM_DIM, SPACE_DIM > , LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , MonodomainSolver< ELEMENT_DIM, SPACE_DIM > , OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM > , SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
• InitialiseHdf5Writer() : AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• InitialiseOdeSystem() : AbstractVanLeeuwen2009WntSwatCellCycleModel , VanLeeuwen2009WntSwatCellCycleModelHypothesisOne , VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
• InitialisePetsc() : PetscSetupUtils
• InitialiseSrnModel() : Cell
• InitialiseTriangulateIo() : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
• InitialiseWriter() : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
• Initialize() : VtkMeshReader< ELEMENT_DIM, SPACE_DIM >
• InitializePetsc() : ExecutableSupport
• Instance() : CardiacNewtonSolver< SIZE, CELLTYPE > , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER > , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver > , CellPropertyRegistry , CombinedOdeSystemInformation , CommandLineArguments , DynamicModelLoaderRegistry , GenericEventHandler< NUM_EVENTS, CONCRETE > , HeartConfig , LogFile , OdeSystemInformation< ODE_SYSTEM > , RandomNumberGenerator , SimulationTime , Warnings , WntConcentration< DIM >
• InternalSolve() : AbstractOneStepIvpOdeSolver , MockEulerIvpOdeSolver , RungeKuttaFehlbergIvpOdeSolver
• IRecvObject() : ObjectCommunicator< CLASS >
• IsAbsolutePath() : FileFinder
• IsAdaptive() : AbstractCellCycleModelOdeSolver , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
• IsAdaptivityParametersPresent() : HeartConfig
• IsAllowedElement() : AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , PottsMesh< DIM >::PottsElementIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• IsAllowedNode() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
• IsANodeCloseToDomainBoundary() : NodesOnlyMesh< SPACE_DIM >
• IsAnyNodalTimeTraceRequested() : HeartConfig
• IsApdMapsRequested() : HeartConfig
• IsAtEnd() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator , AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , PottsMesh< DIM >::PottsElementIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
• IsBinary() : FibreReader< DIM >
• IsBoundaryNode() : Node< SPACE_DIM >
• IsBoxInDomain() : BoxCollection< DIM >
• IsCellAssociatedWithADeletedLocation() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > , AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > , CaBasedCellPopulation< DIM > , PottsBasedCellPopulation< DIM > , VertexBasedCellPopulation< SPACE_DIM >
• IsCellAttachedToLocationIndex() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
• IsConductionVelocityMapsRequested() : HeartConfig
• IsConverged() : AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
• IsDataComplete() : AbstractHdf5Access
• IsDead() : Cell
• IsDeleted() : AbstractElement< ELEMENT_DIM, SPACE_DIM > , Node< SPACE_DIM > , NodeMap , VertexElementMap
• IsDir() : FileFinder
• IsElectrodesPresent() : HeartConfig
• IsElementOnBoundary() : MutableElement< ELEMENT_DIM, SPACE_DIM > , MutableElement< 1, SPACE_DIM >
• IsEmpty() : FileFinder
• IsEnabled() : GenericEventHandler< NUM_EVENTS, CONCRETE >
• IsEnabledImpl() : GenericEventHandler< NUM_EVENTS, CONCRETE >
• ISendObject() : ObjectCommunicator< CLASS >
• IsEndTimeAndNumberOfTimeStepsSetUp() : SimulationTime
• IsFastOnly() : AbstractCardiacCell
• IsFile() : FileFinder
• IsFileFormatBinary() : AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
• IsFileSet() : LogFile
• IsFinished() : SimulationTime
• IsGhostNode() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > , MeshBasedCellPopulationWithGhostNodes< DIM >
• IsGlobalIndexLocal() : DistributedVector , DistributedVectorFactory
• IsHomogeneousMaterial() : SolidMechanicsProblemDefinition< DIM >
• IsIdentityMap() : NodeMap , VertexElementMap
• IsImplicitSolver() : AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > , ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > , ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
• IsInDefineMode() : Hdf5DataWriter
• IsIndexPenultimate() : BoxCollection< DIM >
• IsInitialised() : PetscTools
• IsInteriorBox() : DistributedBoxCollection< DIM >
• IsInternal() : Node< SPACE_DIM >
• IsIsolated() : PetscTools
• IsLabelled() : Alarcon2004OxygenBasedCellCycleOdeSystem
• IsLogged() : Cell
• IsMarkedSpring() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
• IsMatrixSymmetric() : LinearSystem
• IsMaxUpstrokeVelocityMapRequested() : HeartConfig
• IsMeshChanging() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
• IsMeshOnDisk() : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
• IsMeshProvided() : HeartConfig
• IsNearZero() : CompareDoubles
• IsNeumannBoundaryCondition() : PdeAndBoundaryConditions< DIM >
• IsNewerThan() : FileFinder
• IsolatedLabelledCellKiller() : IsolatedLabelledCellKiller< DIM >
• IsolateProcesses() : PetscTools
• IsOutputVisualizerPresent() : HeartConfig
• IsOwned() : DistributedBoxCollection< DIM > , NodesOnlyMesh< SPACE_DIM >
• IsParallel() : PetscTools
• IsParticle() : AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > , Node< SPACE_DIM > , NodeAttributes< SPACE_DIM > , NodeBasedCellPopulationWithParticles< DIM >
• IsPathSet() : FileFinder
• IsPostProcessingRequested() : HeartConfig
• IsPostProcessingSectionPresent() : HeartConfig
• IsPseudoEcgCalculationRequested() : HeartConfig
• IsRealCell() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator
• IsRegionBath() : HeartRegionCode
• IsRegionTissue() : HeartRegionCode
• IsRoomToDivide() : AbstractCaBasedDivisionRule< DIM > , AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > , CaBasedCellPopulation< DIM > , ExclusionCaBasedDivisionRule< SPACE_DIM >
• IsSame() : AbstractCellProperty
• IsSamePoint() : ChastePoint< DIM >
• IsSequential() : PetscTools
• IsSetUp() : AbstractCellCycleModelOdeSolver , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER > , CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
• IsSimulationDefined() : HeartConfig
• IsSimulationResumed() : HeartConfig
• IsSiteAvailable() : CaBasedCellPopulation< DIM >
• IsStartTimeSetUp() : SimulationTime
• IsStretchDependent() : AbstractContractionModel , ConstantActiveTension , FakeBathContractionModel , Kerchoffs2003ContractionModel , Nash2004ContractionModel , NhsContractionModel , NonPhysiologicalContractionModel
• IsStretchRateDependent() : AbstractContractionModel , ConstantActiveTension , FakeBathContractionModel , Kerchoffs2003ContractionModel , Nash2004ContractionModel , NhsContractionModel , NonPhysiologicalContractionModel
• IsSubType() : AbstractCellProperty
• IsTimeAtEnd() : TimeStepper
• IsType() : AbstractCellProperty
• IsUpstrokeTimeMapsRequested() : HeartConfig
• IsWntSetUp() : WntConcentration< DIM >
• IsWorkingCopyModified() : ChasteBuildInfo
• Iterator() : AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator