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Chaste
Release::3.4
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- a -
- Abscissa()
: AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, OdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, OdePdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, PdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
, SpaceConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
- AbstractAlgebraicContractionModel()
: AbstractAlgebraicContractionModel
- AbstractAssemblerSolverHybrid()
: AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, INTERPOLATION_LEVEL >
- AbstractBackwardEulerCardiacCell()
: AbstractBackwardEulerCardiacCell< SIZE >
, AbstractBackwardEulerCardiacCell< 0u >
- AbstractBidomainSolver()
: AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
- AbstractBoundaryCondition()
: AbstractBoundaryCondition< SPACE_DIM >
- AbstractBoundaryConditionsContainer()
: AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractCaBasedDivisionRule()
: AbstractCaBasedDivisionRule< DIM >
- AbstractCachedMeshReader()
: AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
- AbstractCardiacCell()
: AbstractCardiacCell
- AbstractCardiacCellFactory()
: AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM >
- AbstractCardiacCellInterface()
: AbstractCardiacCellInterface
- AbstractCardiacCellWithModifiers()
: AbstractCardiacCellWithModifiers< CARDIAC_CELL >
- AbstractCardiacFeVolumeIntegralAssembler()
: AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
- AbstractCardiacMechanicsSolver()
: AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
- AbstractCardiacMechanicsSolverInterface()
: AbstractCardiacMechanicsSolverInterface< DIM >
- AbstractCardiacProblem()
: AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractCardiacTissue()
: AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
- AbstractCaSwitchingUpdateRule()
: AbstractCaSwitchingUpdateRule< DIM >
- AbstractCaUpdateRule()
: AbstractCaUpdateRule< DIM >
- AbstractCellBasedSimulation()
: AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
- AbstractCellBasedSimulationModifier()
: AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM >
- AbstractCellBasedWriter()
: AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM >
- AbstractCellCycleModel()
: AbstractCellCycleModel
- AbstractCellCycleModelOdeSolver()
: AbstractCellCycleModelOdeSolver
- AbstractCellKiller()
: AbstractCellKiller< SPACE_DIM >
- AbstractCellMutationState()
: AbstractCellMutationState
- AbstractCellPopulation()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- AbstractCellPopulationBoundaryCondition()
: AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM >
- AbstractCellPopulationCountWriter()
: AbstractCellPopulationCountWriter< ELEMENT_DIM, SPACE_DIM >
- AbstractCellPopulationWriter()
: AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >
- AbstractCellProliferativeType()
: AbstractCellProliferativeType
- AbstractCellProperty()
: AbstractCellProperty
- AbstractCellWriter()
: AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >
- AbstractCentreBasedCellPopulation()
: AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
- AbstractChasteRegion()
: AbstractChasteRegion< SPACE_DIM >
- AbstractCompressibleMaterialLaw()
: AbstractCompressibleMaterialLaw< DIM >
- AbstractContinuumMechanicsAssembler()
: AbstractContinuumMechanicsAssembler< DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
- AbstractContinuumMechanicsSolver()
: AbstractContinuumMechanicsSolver< DIM >
- AbstractContractionModel()
: AbstractContractionModel
- AbstractCorrectionTermAssembler()
: AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractCryptStatistics()
: AbstractCryptStatistics
- AbstractCvodeCell()
: AbstractCvodeCell
- AbstractCvodeCellWithDataClamp()
: AbstractCvodeCellWithDataClamp
- AbstractCvodeSystem()
: AbstractCvodeSystem
- AbstractDynamicLinearPdeSolver()
: AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractElement()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
- AbstractExtendedBidomainSolver()
: AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
- AbstractFeAssemblerCommon()
: AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
- AbstractFeAssemblerInterface()
: AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
- AbstractFeCableIntegralAssembler()
: AbstractFeCableIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
- AbstractFeSurfaceIntegralAssembler()
: AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractFeVolumeIntegralAssembler()
: AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
- AbstractFileComparison()
: AbstractFileComparison
- AbstractForce()
: AbstractForce< ELEMENT_DIM, SPACE_DIM >
- AbstractGeneralizedRushLarsenCardiacCell()
: AbstractGeneralizedRushLarsenCardiacCell
- AbstractHdf5Access()
: AbstractHdf5Access
- AbstractHdf5Converter()
: AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >
- AbstractIncompressibleMaterialLaw()
: AbstractIncompressibleMaterialLaw< DIM >
- AbstractIvpOdeSolver()
: AbstractIvpOdeSolver
- AbstractLinearEllipticPde()
: AbstractLinearEllipticPde< ELEMENT_DIM, SPACE_DIM >
- AbstractLinearPdeSolver()
: AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractLookupTableCollection()
: AbstractLookupTableCollection
- AbstractMaterialLaw()
: AbstractMaterialLaw< DIM >
- AbstractMesh()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- AbstractMeshWriter()
: AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AbstractModifier()
: AbstractModifier
- AbstractNonlinearAssemblerSolverHybrid()
: AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractNonlinearElasticitySolver()
: AbstractNonlinearElasticitySolver< DIM >
- AbstractOdeBasedCellCycleModel()
: AbstractOdeBasedCellCycleModel
- AbstractOdeBasedContractionModel()
: AbstractOdeBasedContractionModel
- AbstractOdeSrnModel()
: AbstractOdeSrnModel
- AbstractOdeSystem()
: AbstractOdeSystem
- AbstractOdeSystemForCoupledPdeSystem()
: AbstractOdeSystemForCoupledPdeSystem
- AbstractOdeSystemInformation()
: AbstractOdeSystemInformation
- AbstractOdeSystemWithAnalyticJacobian()
: AbstractOdeSystemWithAnalyticJacobian
- AbstractOffLatticeCellPopulation()
: AbstractOffLatticeCellPopulation< ELEMENT_DIM, SPACE_DIM >
- AbstractOnLatticeCellPopulation()
: AbstractOnLatticeCellPopulation< DIM >
- AbstractOutputModifier()
: AbstractOutputModifier
- AbstractParameterisedSystem()
: AbstractParameterisedSystem< VECTOR >
- AbstractPerElementWriter()
: AbstractPerElementWriter< ELEMENT_DIM, SPACE_DIM, DATA_SIZE >
- AbstractPottsUpdateRule()
: AbstractPottsUpdateRule< DIM >
- AbstractRushLarsenCardiacCell()
: AbstractRushLarsenCardiacCell
- AbstractSimpleCellCycleModel()
: AbstractSimpleCellCycleModel
- AbstractSimpleGenerationBasedCellCycleModel()
: AbstractSimpleGenerationBasedCellCycleModel
- AbstractSrnModel()
: AbstractSrnModel
- AbstractStaticLinearPdeSolver()
: AbstractStaticLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AbstractSteadyStateRunner()
: AbstractSteadyStateRunner
- AbstractStimulusFactory()
: AbstractStimulusFactory< ELEMENT_DIM, SPACE_DIM >
- AbstractTargetAreaModifier()
: AbstractTargetAreaModifier< DIM >
- AbstractTetrahedralElement()
: AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
, AbstractTetrahedralElement< 0, SPACE_DIM >
- AbstractTetrahedralMesh()
: AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- AbstractTetrahedralMeshWriter()
: AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AbstractTimeAdaptivityController()
: AbstractTimeAdaptivityController
- AbstractTwoBodyInteractionForce()
: AbstractTwoBodyInteractionForce< ELEMENT_DIM, SPACE_DIM >
- AbstractUntemplatedParameterisedSystem()
: AbstractUntemplatedParameterisedSystem
- AbstractVanLeeuwen2009WntSwatCellCycleModel()
: AbstractVanLeeuwen2009WntSwatCellCycleModel
- AbstractVertexBasedDivisionRule()
: AbstractVertexBasedDivisionRule< SPACE_DIM >
- AbstractWntOdeBasedCellCycleModel()
: AbstractWntOdeBasedCellCycleModel
- AcceptCellWriter()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, CaBasedCellPopulation< DIM >
, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, NodeBasedCellPopulation< DIM >
, PottsBasedCellPopulation< DIM >
, VertexBasedCellPopulation< SPACE_DIM >
- AcceptCellWritersAcrossPopulation()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, MeshBasedCellPopulationWithGhostNodes< DIM >
, NodeBasedCellPopulationWithParticles< DIM >
- AcceptPopulationCountWriter()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, CaBasedCellPopulation< DIM >
, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, NodeBasedCellPopulation< DIM >
, PottsBasedCellPopulation< DIM >
, VertexBasedCellPopulation< SPACE_DIM >
- AcceptPopulationWriter()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, CaBasedCellPopulation< DIM >
, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, NodeBasedCellPopulation< DIM >
, PottsBasedCellPopulation< DIM >
, VertexBasedCellPopulation< SPACE_DIM >
- ActivationOutputModifier()
: ActivationOutputModifier
- AddActiveStressAndStressDerivative()
: AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
, AbstractNonlinearElasticitySolver< DIM >
- AddAppliedForceContribution()
: Node< SPACE_DIM >
, NodeAttributes< SPACE_DIM >
- AddAttribute()
: ElementAttributes< ELEMENT_DIM, SPACE_DIM >
, NodeAttributes< SPACE_DIM >
- AddBoundaryElement()
: Node< SPACE_DIM >
- AddCaSwitchingUpdateRule()
: OnLatticeSimulation< DIM >
- AddCaUpdateRule()
: OnLatticeSimulation< DIM >
- AddCell()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, CaBasedCellPopulation< DIM >
, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, MeshBasedCellPopulationWithGhostNodes< DIM >
, NodeBasedCellPopulation< DIM >
, NodeBasedCellPopulationWithParticles< DIM >
, PottsBasedCellPopulation< DIM >
, VertexBasedCellPopulation< SPACE_DIM >
- AddCellData()
: VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
, VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AddCellIdOfT2Swap()
: VertexBasedCellPopulation< SPACE_DIM >
- AddCellKiller()
: AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
- AddCellPopulationBoundaryCondition()
: OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
- AddCellPopulationCountWriter()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- AddCellProperty()
: Cell
- AddCellsToSendLeft()
: NodeBasedCellPopulation< DIM >
- AddCellsToSendRight()
: NodeBasedCellPopulation< DIM >
- AddCellUsingLocationIndex()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, CaBasedCellPopulation< DIM >
- AddCellWriter()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- AddDataOnNodes()
: Hdf5ToXdmfConverter< ELEMENT_DIM, SPACE_DIM >
, XdmfMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AddDirichletBoundaryCondition()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AddElement()
: Box< DIM >
, MutableMesh< ELEMENT_DIM, SPACE_DIM >
, MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
, Node< SPACE_DIM >
, PottsMesh< DIM >
- AddElementAttribute()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
- AddExtraBoundaryNodes()
: QuadraticMeshHelper< DIM >
- AddFace()
: VertexElement< ELEMENT_DIM, SPACE_DIM >
- AddForce()
: OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >
- AddForceContribution()
: AbstractForce< ELEMENT_DIM, SPACE_DIM >
, AbstractTwoBodyInteractionForce< ELEMENT_DIM, SPACE_DIM >
, BuskeCompressionForce< DIM >
, ChemotacticForce< DIM >
, CryptProjectionForce
, DiffusionForce< DIM >
, FarhadifarForce< DIM >
, LinearSpringWithVariableSpringConstantsForce< DIM >
, NagaiHondaForce< DIM >
, RepulsionForce< DIM >
, VertexCryptBoundaryForce< DIM >
, WelikyOsterForce< DIM >
- AddHaloCell()
: NodeBasedCellPopulation< DIM >
- AddHaloNode()
: NodesOnlyMesh< SPACE_DIM >
- AddHaloNodesToBoxes()
: NodesOnlyMesh< SPACE_DIM >
- AddIdentityBlockForDummyPressureVariables()
: AbstractContinuumMechanicsSolver< DIM >
- AddInternalNodesToBoundaryElements()
: QuadraticMeshHelper< DIM >
- AddInternalNodesToElements()
: QuadraticMeshHelper< DIM >
- AddLhsMultipleValues()
: LinearSystem
- AddLocationOfT2Swap()
: VertexBasedCellPopulation< SPACE_DIM >
- AddModifier()
: AbstractCardiacCellWithModifiers< CARDIAC_CELL >
- AddMovedCell()
: NodeBasedCellPopulation< DIM >
- AddMovedNode()
: NodesOnlyMesh< SPACE_DIM >
- AddMultipleValues()
: PetscMatTools
, PetscVecTools
- AddNeumannBoundaryCondition()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AddNode()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
, AbstractOffLatticeCellPopulation< ELEMENT_DIM, SPACE_DIM >
, Box< DIM >
, Cylindrical2dMesh
, Cylindrical2dNodesOnlyMesh
, Cylindrical2dVertexMesh
, MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, MutableElement< ELEMENT_DIM, SPACE_DIM >
, MutableElement< 1, SPACE_DIM >
, MutableMesh< ELEMENT_DIM, SPACE_DIM >
, MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
, NodeBasedCellPopulation< DIM >
, NodesOnlyMesh< SPACE_DIM >
, PottsElement< DIM >
, Toroidal2dVertexMesh
, VertexBasedCellPopulation< SPACE_DIM >
- AddNodeAndCellToSendLeft()
: NodeBasedCellPopulation< DIM >
- AddNodeAndCellToSendRight()
: NodeBasedCellPopulation< DIM >
- AddNodeAttribute()
: Node< SPACE_DIM >
- AddNodesToBoundaryElements()
: QuadraticMeshHelper< DIM >
- AddNodesToBoxes()
: NodesOnlyMesh< SPACE_DIM >
- AddNodeToBoundaryElement()
: QuadraticMeshHelper< DIM >
- AddNodeWithFixedIndex()
: NodesOnlyMesh< SPACE_DIM >
- AddOutputModifier()
: AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AddPairsFromBox()
: DistributedBoxCollection< DIM >
- AddPdeAndBc()
: CellBasedPdeHandler< DIM >
- AddPeriodicBoundaryCondition()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AddPointData()
: VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
, VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AddPopulationWriter()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- AddPottsUpdateRule()
: OnLatticeSimulation< DIM >
- AddProperty()
: CellPropertyCollection
- AddProvenance()
: VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AddReceivedCells()
: NodeBasedCellPopulation< DIM >
- AddReceivedHaloCells()
: NodeBasedCellPopulation< DIM >
- AddRhsMultipleValues()
: LinearSystem
- AddScaledVector()
: PetscVecTools
- AddSimulationModifier()
: AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
- AddStimulus()
: MultiStimulus
- AddStressToAverageStressPerElement()
: AbstractNonlinearElasticitySolver< DIM >
- AddSwitchingUpdateRule()
: CaBasedCellPopulation< DIM >
- AddTensorCellData()
: VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AddTensorPointData()
: VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AddToElement()
: PetscMatTools
, PetscVecTools
- AddToMatrixElement()
: LinearSystem
- AddToRhsVectorElement()
: LinearSystem
- AddTrailingSlash()
: OutputFileHandler
- AddUpdateRule()
: CaBasedCellPopulation< DIM >
, PottsBasedCellPopulation< DIM >
- AddWarning()
: Warnings
- AdhesionPottsUpdateRule()
: AdhesionPottsUpdateRule< DIM >
- AdjustOdeParameters()
: AbstractVanLeeuwen2009WntSwatCellCycleModel
, Alarcon2004OxygenBasedCellCycleModel
, CellCycleModelOdeHandler
, SingleOdeWntCellCycleModel
, WntCellCycleModel
- AdjustOutOfRangeSlowValues()
: AbstractCardiacCell
- AdjustStepSize()
: RungeKuttaFehlbergIvpOdeSolver
- AdvanceAlongUnlimitedDimension()
: AbstractDataWriter
, ColumnDataWriter
, Hdf5DataWriter
, ParallelColumnDataWriter
- AdvanceOneTimeStep()
: TimeStepper
- Alarcon2004OxygenBasedCellCycleModel()
: Alarcon2004OxygenBasedCellCycleModel
- Alarcon2004OxygenBasedCellCycleOdeSystem()
: Alarcon2004OxygenBasedCellCycleOdeSystem
- AllocateMatrixMemory()
: AbstractContinuumMechanicsSolver< DIM >
- AmMaster()
: PetscTools
- AmTopMost()
: PetscTools
- AnalyseMeshForBath()
: BidomainProblem< DIM >
, ExtendedBidomainProblem< DIM >
- AnalyticJacobian()
: AbstractOdeSystemWithAnalyticJacobian
, TysonNovak2001OdeSystem
- AnyNonZeroNeumannConditions()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ApcOneHitCellMutationState()
: ApcOneHitCellMutationState
- ApcTwoHitCellMutationState()
: ApcTwoHitCellMutationState
- ApoptoticCellKiller()
: ApoptoticCellKiller< SPACE_DIM >
- ApoptoticCellProperty()
: ApoptoticCellProperty
- AppendLocalDataToFiles()
: AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
, CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >
, MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >
- ApplyDirichletBoundaryConditions()
: AbstractContinuumMechanicsSolver< DIM >
- ApplyDirichletConditions()
: AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ApplyDirichletToLinearProblem()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ApplyDirichletToNonlinearJacobian()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ApplyDirichletToNonlinearResidual()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ApplyPeriodicBcsToLinearProblem()
: BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- ApplyPermutation()
: Hdf5DataWriter
- ArchiveOpener()
: ArchiveOpener< Archive, Stream >
- AreCellularTransmuralHeterogeneitiesRequested()
: HeartConfig
- AreCryptSectionCellsLabelled()
: AbstractCryptStatistics
- Assemble()
: AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
- AssembleFinalLinearSystem()
: LinearSystem
- AssembleIntermediateLinearSystem()
: LinearSystem
- AssembleMatrix()
: AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
- AssembleOnBoundaryElement()
: AbstractNonlinearElasticitySolver< DIM >
, ContinuumMechanicsNeumannBcsAssembler< DIM >
- AssembleOnBoundaryElementForPressureOnDeformedBc()
: AbstractNonlinearElasticitySolver< DIM >
- AssembleOnCableElement()
: AbstractFeCableIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
- AssembleOnElement()
: AbstractContinuumMechanicsAssembler< DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
, AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
, CompressibleNonlinearElasticitySolver< DIM >
, IncompressibleNonlinearElasticitySolver< DIM >
- AssembleOnSurfaceElement()
: AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- AssembleSystem()
: AbstractNonlinearElasticitySolver< DIM >
, CompressibleNonlinearElasticitySolver< DIM >
, IncompressibleNonlinearElasticitySolver< DIM >
, StokesFlowSolver< DIM >
- AssembleVector()
: AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
- AssignCellId()
: CellId
- AtBeginningOfTimestep()
: AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, BidomainProblem< DIM >
- AugmentCellData()
: VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
- AveragedSourcePde()
: AveragedSourcePde< DIM >
- AxisymmetricConductivityTensors()
: AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM >