Chaste Commit::ca8ccdedf819b6e02855bc0e8e6f50bdecbc5208
Toroidal2dVertexMesh.hpp
1/*
2
3Copyright (c) 2005-2024, University of Oxford.
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15 this list of conditions and the following disclaimer.
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34*/
35
36#ifndef TOROIDAL2DVERTEXMESH_HPP_
37#define TOROIDAL2DVERTEXMESH_HPP_
38
40#include <boost/serialization/base_object.hpp>
41
42#include "MutableVertexMesh.hpp"
43#include "Toroidal2dMesh.hpp"
44
55{
56 friend class TestToroidal2dVertexMesh;
57
58private:
59
61 double mWidth;
62
64 double mHeight;
65
71
84 template<class Archive>
85 void serialize(Archive & archive, const unsigned int version)
86 {
87 archive & boost::serialization::base_object<MutableVertexMesh<2,2> >(*this);
88 archive & mWidth;
89 archive & mHeight;
90 mpMeshForVtk = nullptr;
91 }
92
93public:
94
105 Toroidal2dVertexMesh(double width,
106 double height,
107 std::vector<Node<2>*> nodes,
108 std::vector<VertexElement<2,2>*> vertexElements,
109 double cellRearrangementThreshold=0.01,
110 double t2Threshold=0.001);
111
116
124 Toroidal2dVertexMesh(Toroidal2dMesh& rMesh, bool isBounded = false);
125
130
142 c_vector<double, 2> GetVectorFromAtoB(const c_vector<double, 2>& rLocation1, const c_vector<double, 2>& rLocation2);
143
153 void SetNode(unsigned nodeIndex, ChastePoint<2> point);
154
164 double GetWidth(const unsigned& rDimension) const;
165
171 void SetHeight(double height);
172
178 void SetWidth(double width);
179
187 unsigned AddNode(Node<2>* pNewNode);
188
195 void CheckNodeLocation(Node<2>* pNode);
196
207
215 void ConstructFromMeshReader(AbstractMeshReader<2,2>& rMeshReader, double width, double height);
216};
217
220
221#endif /*TOROIDAL2DVERTEXMESH_HPP_*/
gcov doesn't like this file...
#define CHASTE_CLASS_EXPORT(T)
Definition Node.hpp:59
unsigned AddNode(Node< 2 > *pNewNode)
VertexMesh< 2, 2 > * GetMeshForVtk()
void serialize(Archive &archive, const unsigned int version)
VertexMesh< 2, 2 > * mpMeshForVtk
double GetWidth(const unsigned &rDimension) const
void ConstructFromMeshReader(AbstractMeshReader< 2, 2 > &rMeshReader, double width, double height)
friend class boost::serialization::access
void CheckNodeLocation(Node< 2 > *pNode)
void SetHeight(double height)
void SetNode(unsigned nodeIndex, ChastePoint< 2 > point)
c_vector< double, 2 > GetVectorFromAtoB(const c_vector< double, 2 > &rLocation1, const c_vector< double, 2 > &rLocation2)