Here is a list of all documented class members with links to the class documentation for each member:
- i -
- IdentifySwapType()
: MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
- ImplicitCardiacMechanicsSolver()
: ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
- ImplicitSolveForQ()
: NhsModelWithBackwardSolver
- ImportFromMesher()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- ImposeBoundaryCondition()
: CryptSimulationBoundaryCondition< DIM >
, AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM >
, PlaneBoundaryCondition< DIM >
, SphereGeometryBoundaryCondition< DIM >
- IncludesPoint()
: Element< ELEMENT_DIM, SPACE_DIM >
- IncompressibleNonlinearElasticitySolver()
: IncompressibleNonlinearElasticitySolver< DIM >
- increment()
: AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::ElementIterator
, AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::NodeIterator
- IncrementCellCount()
: AbstractCellProperty
- IncrementInterpolatedGradientQuantities()
: AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
- IncrementInterpolatedQuantities()
: AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
, LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, CellBasedPdeSolver< DIM >
, AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
- IncrementTimeOneStep()
: SimulationTime
- Init()
: AbstractCardiacCell
, AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM >
, AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM >
, OrthotropicConductivityTensors< ELEMENT_DIM, SPACE_DIM >
, AbstractCvodeSystem
, Alarcon2004OxygenBasedCellCycleOdeSystem
, TysonNovak2001OdeSystem
, Mirams2010WntOdeSystem
, VanLeeuwen2009WntSwatCellCycleOdeSystem
, WntCellCycleOdeSystem
- Initialise()
: AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
, CellwiseOdeSystemInformation< ODE_SYSTEM >
, AbstractCardiacMechanicsSolverInterface< DIM >
, CellwiseOdeSystemInformation< ODE_SYSTEM >
, AbstractOdeSystemInformation
, CombinedOdeSystemInformation
, OdeSystemInformation< ODE_SYSTEM >
, CellwiseOdeSystemInformation< ODE_SYSTEM >
, AbstractCellCycleModel
, AbstractCellCycleModelOdeSolver
, AbstractSimpleCellCycleModel
, Alarcon2004OxygenBasedCellCycleModel
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
, DeltaNotchCellCycleModel
, StochasticOxygenBasedCellCycleModel
, TysonNovakCellCycleModel
, AbstractVanLeeuwen2009WntSwatCellCycleModel
, SingleOdeWntCellCycleModel
, StochasticWntCellCycleModel
, WntCellCycleModel
, OdeSystemInformation< ODE_SYSTEM >
, AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, OdeSystemInformation< ODE_SYSTEM >
, CellwiseOdeSystemInformation< ODE_SYSTEM >
, CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM >
, CellwiseOdeSystemInformation< ODE_SYSTEM >
, OdeSystemInformation< ODE_SYSTEM >
- InitialiseCellCycleModel()
: Cell
- InitialiseCellPdeElementMap()
: CellBasedPdeHandler< DIM >
- InitialiseCells()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- InitialiseContractionModels()
: AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
, ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
, ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
- InitialiseDaughterCell()
: AbstractCellCycleModel
, AbstractSimpleCellCycleModel
, AbstractSimpleGenerationBasedCellCycleModel
, StochasticOxygenBasedCellCycleModel
, TysonNovakCellCycleModel
, SimpleWntCellCycleModel
, StochasticWntCellCycleModel
- InitialiseForSolve()
: AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
, BidomainSolver< ELEMENT_DIM, SPACE_DIM >
, AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
, ExtendedBidomainSolver< ELEM_DIM, SPACE_DIM >
, MonodomainSolver< ELEMENT_DIM, SPACE_DIM >
, OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM >
, AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
, SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
, CellBasedPdeSolver< DIM >
- InitialiseHdf5Writer()
: AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- InitialiseOdeSystem()
: AbstractVanLeeuwen2009WntSwatCellCycleModel
, VanLeeuwen2009WntSwatCellCycleModelHypothesisOne
, VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
- InitialiseTriangulateIo()
: TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
- InitialiseWriter()
: AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
- Initialize()
: VtkMeshReader< ELEMENT_DIM, SPACE_DIM >
- InitializePetsc()
: ExecutableSupport
- InitializeSolutionOnAdaptedMesh()
: AdaptiveBidomainProblem
- Instance()
: CardiacNewtonSolver< SIZE, CELLTYPE >
, DynamicModelLoaderRegistry
, HeartConfig
, CommandLineArguments
, LogFile
, RandomNumberGenerator
, GenericEventHandler< NUM_EVENTS, CONCRETE >
, Warnings
, CombinedOdeSystemInformation
, OdeSystemInformation< ODE_SYSTEM >
, SimulationTime
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
, CellPropertyRegistry
, WntConcentration< DIM >
- InternalSolve()
: AbstractOneStepIvpOdeSolver
, MockEulerIvpOdeSolver
, RungeKuttaFehlbergIvpOdeSolver
- intracellularCalciumConcentration
: ContractionModelInputParameters_
- IsAbsolutePath()
: FileFinder
- IsAdaptive()
: AbstractCellCycleModelOdeSolver
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
- IsAdaptivityParametersPresent()
: HeartConfig
- IsAllowedElement()
: VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator
, PottsMesh< DIM >::PottsElementIterator
, SemMesh< DIM >::SemElementIterator
- IsAllowedNode()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
- IsAnyNodalTimeTraceRequested()
: HeartConfig
- IsApdMapsRequested()
: HeartConfig
- IsAtEnd()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator
, VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
, PottsMesh< DIM >::PottsElementIterator
, SemMesh< DIM >::SemElementIterator
, AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator
- IsBoundaryNode()
: Node< SPACE_DIM >
- IsCellAssociatedWithADeletedLocation()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
, AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, MultipleCaBasedCellPopulation< DIM >
, VertexBasedCellPopulation< DIM >
, PottsBasedCellPopulation< DIM >
- IsCellAttachedToLocationIndex()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
- IsConductionVelocityMapsRequested()
: HeartConfig
- IsConverged()
: AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
- IsDataComplete()
: Hdf5DataReader
- IsDead()
: Cell
- IsDeleted()
: AbstractElement< ELEMENT_DIM, SPACE_DIM >
, Node< SPACE_DIM >
, NodeMap
, VertexElementMap
- IsDir()
: FileFinder
- IsElectrodesPresent()
: HeartConfig
- IsElementOnBoundary()
: MutableElement< ELEMENT_DIM, SPACE_DIM >
, MutableElement< 1, SPACE_DIM >
- IsEmpty()
: FileFinder
- IsEnabled()
: GenericEventHandler< NUM_EVENTS, CONCRETE >
- IsEnabledImpl()
: GenericEventHandler< NUM_EVENTS, CONCRETE >
- IsEndTimeAndNumberOfTimeStepsSetUp()
: SimulationTime
- IsFastOnly()
: AbstractCardiacCell
- IsFile()
: FileFinder
- IsFileFormatBinary()
: AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >
, TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
- IsFileSet()
: LogFile
- IsFinished()
: SimulationTime
- IsFlagged()
: Node< SPACE_DIM >
, AbstractElement< ELEMENT_DIM, SPACE_DIM >
- IsGhostNode()
: AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, MeshBasedCellPopulationWithGhostNodes< DIM >
- IsGlobalIndexLocal()
: DistributedVector
, DistributedVectorFactory
- IsHomogeneousMaterial()
: SolidMechanicsProblemDefinition< DIM >
- IsIdentityMap()
: VertexElementMap
, NodeMap
- IsImplicitSolver()
: AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
, ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
, ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
- IsInternal()
: Node< SPACE_DIM >
- IsLabelled()
: Alarcon2004OxygenBasedCellCycleOdeSystem
- IsLogged()
: Cell
- IsMarkedSpring()
: AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
- IsMatrixSymmetric()
: LinearSystem
- IsMaxUpstrokeVelocityMapRequested()
: HeartConfig
- IsMeshChanging()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- IsMeshOnDisk()
: AbstractMesh< ELEMENT_DIM, SPACE_DIM >
- IsMeshProvided()
: HeartConfig
- IsNearZero()
: CompareDoubles
- IsNeumannBoundaryCondition()
: PdeAndBoundaryConditions< DIM >
- IsNewerThan()
: FileFinder
- IsolateProcesses()
: PetscTools
- IsOutputVisualizerPresent()
: HeartConfig
- IsParallel()
: PetscTools
- IsParticle()
: AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >
, NodeBasedCellPopulationWithParticles< DIM >
- IsPathSet()
: FileFinder
- IsPostProcessingRequested()
: HeartConfig
- IsPostProcessingSectionPresent()
: HeartConfig
- IsPseudoEcgCalculationRequested()
: HeartConfig
- IsRealCell()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator
- IsRegionBath()
: HeartRegionCode
- IsRegionTissue()
: HeartRegionCode
- IsSame()
: AbstractCellProperty
- IsSamePoint()
: ChastePoint< DIM >
- IsSequential()
: PetscTools
- IsSetUp()
: AbstractCellCycleModelOdeSolver
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
, CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
- IsSimulationDefined()
: HeartConfig
- IsSimulationResumed()
: HeartConfig
- IsSiteAvailable()
: MultipleCaBasedCellPopulation< DIM >
- IsStartTimeSetUp()
: SimulationTime
- IsStretchDependent()
: Kerchoffs2003ContractionModel
, Nash2004ContractionModel
, NhsContractionModel
, AbstractContractionModel
, NonPhysiologicalContractionModel
, FakeBathContractionModel
- IsStretchRateDependent()
: Nash2004ContractionModel
, Kerchoffs2003ContractionModel
, FakeBathContractionModel
, AbstractContractionModel
, NhsContractionModel
, NonPhysiologicalContractionModel
- IsSubType()
: AbstractCellProperty
- IsTimeAtEnd()
: TimeStepper
- IsType()
: AbstractCellProperty
- IsUpstrokeTimeMapsRequested()
: HeartConfig
- IsWntSetUp()
: WntConcentration< DIM >
- IsWorkingCopyModified()
: ChasteBuildInfo
- Iterator()
: AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator
, CellPropertyCollection
- IteratorType
: CellPropertyCollection