Chaste: Class Members

Here is a list of all documented class members with links to the class documentation for each member:

- m -

m128o4275 : RungeKuttaFehlbergIvpOdeSolver
m12o13 : RungeKuttaFehlbergIvpOdeSolver
m1408o2565 : RungeKuttaFehlbergIvpOdeSolver
m1859o4104 : RungeKuttaFehlbergIvpOdeSolver
m1932o2197 : RungeKuttaFehlbergIvpOdeSolver
m1o360 : RungeKuttaFehlbergIvpOdeSolver
m2197o4104 : RungeKuttaFehlbergIvpOdeSolver
m2197o75240 : RungeKuttaFehlbergIvpOdeSolver
m25o216 : RungeKuttaFehlbergIvpOdeSolver
m2o55 : RungeKuttaFehlbergIvpOdeSolver
m3544o2565 : RungeKuttaFehlbergIvpOdeSolver
m3680o513 : RungeKuttaFehlbergIvpOdeSolver
m439o216 : RungeKuttaFehlbergIvpOdeSolver
m7200o2197 : RungeKuttaFehlbergIvpOdeSolver
m7296o2197 : RungeKuttaFehlbergIvpOdeSolver
m845o4104 : RungeKuttaFehlbergIvpOdeSolver
m8o27 : RungeKuttaFehlbergIvpOdeSolver
mA : NhsContractionModel , ExponentialMaterialLaw< DIM > , PoleZeroMaterialLaw< DIM > , SchmidCostaExponentialLaw2d , Mirams2010WntOdeSystem
mA1 : NhsContractionModel
mA2 : NhsContractionModel
ma2d : WntCellCycleOdeSystem
mA3 : NhsContractionModel
ma3d : WntCellCycleOdeSystem
ma4d : WntCellCycleOdeSystem
ma5d : WntCellCycleOdeSystem
mAbsPath : FileFinder
mActivationTime : Kerchoffs2003ContractionModel
mActivationVoltage : Kerchoffs2003ContractionModel
mActiveNodeIndexQueue : DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mad : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mAddedNodes : MutableMesh< ELEMENT_DIM, SPACE_DIM > , NodeBasedTissue< DIM >
mAdditionalFieldNames : CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >
mAdditionalTimes : TimeStepper
mAdditionalTimesReached : TimeStepper
Mahajan2008OdeSystem() : Mahajan2008OdeSystem
Make2dPeriodicCryptMesh() : HoneycombMeshGenerator
MakeFoldersAndReturnFullPath() : OutputFileHandler
Maleckar2009OdeSystem() : Maleckar2009OdeSystem
mAllocatedMaterialLawMemory : AbstractCardiacMechanicsAssembler< DIM >
mAllocatedMemory : CellwiseData< DIM >
mAllocatedMemoryForForceCollection : TissueSimulation< DIM >
mAllocatedMemoryForMesh : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mAlpha : FitzHughNagumo1961OdeSystem , PolynomialMaterialLaw3d
mAlpha0 : NhsContractionModel
mAlpha1 : NhsContractionModel
mAlpha2 : NhsContractionModel
mAlpha3 : NhsContractionModel
mAlphaR1 : NhsContractionModel
mAlphaR2 : NhsContractionModel
mAncestor : TissueCell
mAncillaryFilename : ColumnDataReader
mAncillaryRowStartPosition : ColumnDataWriter
mAncillaryRowWidth : ColumnDataWriter
mAnyNonZeroNeumannConditionsForUnknown : BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mApoptosisTime : TissueConfig
mApoptoticSpringCompressionStiffness : TissueConfig
mApoptoticSpringTensionStiffness : TissueConfig
mAreaBasedDampingConstantParameter : TissueConfig
mAreActive : Electrodes< DIM >
MarkAsDeleted() : AbstractElement< ELEMENT_DIM, SPACE_DIM > , BoundaryElement< ELEMENT_DIM, SPACE_DIM > , Element< ELEMENT_DIM, SPACE_DIM > , Node< SPACE_DIM > , VertexElement< ELEMENT_DIM, SPACE_DIM > , VertexElement< 1, SPACE_DIM >
MarkSpring() : MeshBasedTissue< DIM >
MASTER_RANK : PetscTools
Max() : CardiacElectroMechanicsProblem< DIM >
MAX_DATASET_RANK : Hdf5DataReader
MAX_NEWTON_ABS_TOL : AbstractNonlinearElasticityAssembler< DIM >
MaxLoggingLevel() : LogFile
mB : ExponentialMaterialLaw< DIM > , PoleZeroMaterialLaw< DIM > , SchmidCostaExponentialLaw2d , Mirams2010WntOdeSystem
mBaseDirectory : OutputDirectoryFifoQueue
mBaseName : Hdf5DataReader , ColumnDataWriter , Hdf5DataWriter , AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM > , InventorVoronoiWriter
mBeta0 : NhsContractionModel
mBeta1 : NhsContractionModel
mBetaCateninDivisionThreshold : SingleOdeWntCellCycleModel
mBetaCatResultsFile : CryptSimulation2d
mBetaCatSpringScaler : TissueConfig
mBirthTime : AbstractCellCycleModel
mBodyForce : AbstractNonlinearElasticityAssembler< DIM >
mBottom : Cylindrical2dMesh , HoneycombMeshGenerator
mBottomHaloNodes : Cylindrical2dMesh
mBoundaryElementIndices : Node< SPACE_DIM >
mBoundaryElementJacobianDeterminants : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mBoundaryElements : AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > , NonlinearElasticityAssembler< DIM >
mBoundaryElementsMapping : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mBoundaryElementWeightedDirections : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mBoundaryFaceData : AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
mBoundaryFacesRead : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mBoundaryNodes : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
mBoxes : BoxCollection< DIM >
mBoxWidth : BoxCollection< DIM >
mC : Mirams2010WntOdeSystem
mC1 : MooneyRivlinMaterialLaw< DIM >
mC2 : MooneyRivlinMaterialLaw< DIM >
mCalcium50ref : NhsContractionModel
mCalciumI : NhsContractionModel
mCalciumTrop50 : NhsContractionModel
mCalciumTroponinMax : NhsContractionModel
mCallCount : MockEulerIvpOdeSolver
mCanDivide : TissueCell
mCellBoundaryAdhesionEnergyParameter : TissueConfig
mCellCellAdhesionEnergyParameter : TissueConfig
mCellCentre : VoronoiCell
mCellCount : AbstractCellMutationState
mCellCyclePhaseCount : AbstractTissue< DIM >
mCellHeterogeneityAreas : HeartConfigRelatedCellFactory< SPACE_DIM >
mCellId : TissueCell
mCellIter : AbstractTissue< DIM >::Iterator
mCellKillers : TissueSimulation< DIM >
mCellLocationMap : AbstractTissue< DIM >
mCellProliferativeType : TissueCell
mCellProliferativeTypeCount : AbstractTissue< DIM >
mCells : AbstractTissue< DIM >
mCellsDistributed : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mCheckedAndCommunicatedIfDirichletBcs : AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mCleanDirectory : Hdf5DataWriter
mColour : AbstractCellMutationState
mConcentrated : ParallelColumnDataWriter
mConstantConductivities : AbstractConductivityTensors< SPACE_DIM >
mConstantDataForTesting : CellwiseData< DIM >
mConstantFibreSheetDirections : AbstractCardiacMechanicsAssembler< DIM >
mConstantWntValueForTesting : WntConcentration< DIM >
mContractionModel : CardiacElectroMechanicsProblem< DIM >
mContractionModelOdeTimeStep : CardiacElectroMechanicsProblem< DIM >
mContractionModelSystems : AbstractCardiacMechanicsAssembler< DIM >
mCounterOfPlateauDepolarisations : CellProperties
mCounters : FineCoarseMeshPair< DIM >
mCpuTime : GenericEventHandler< NUM_EVENTS, CONCRETE >
mCriticalHypoxicDuration : TissueConfig
mCryptDepth : HoneycombMeshGenerator
mCryptLength : TissueConfig
mCryptProjectionParameterA : TissueConfig
mCryptProjectionParameterB : TissueConfig
mCryptWidth : TissueConfig , HoneycombMeshGenerator
mCurrentCellCyclePhase : AbstractCellCycleModel
mCurrentSolution : AbstractNonlinearElasticityAssembler< DIM >
mCurrentSolutionOrGuessReplicated : AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
mCurrentTime : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , AbstractCardiacMechanicsAssembler< DIM > , SimulationTime
mCurrentTimeStep : Hdf5DataWriter
mCycB_threshold : TysonNovak2001OdeSystem
mCycleLengths : CellProperties
mCylindrical : HoneycombMeshGenerator
mD : Mirams2010WntOdeSystem
mDa : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDampingConstantMutant : TissueConfig
mDampingConstantNormal : TissueConfig
mData : FourthOrderTensor< DIM > , CellwiseData< DIM >
mDataFile : AbstractConductivityTensors< SPACE_DIM >
mDataFilename : ColumnDataReader
mDataFixedDimensionSize : Hdf5DataWriter
mDatasetDims : Hdf5DataWriter
mDatasetId : Hdf5DataWriter
mDc : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDca : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDct : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDd : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDdx : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDeactivationVoltage : Kerchoffs2003ContractionModel
mDeathTime : TissueCell
mDefaultIonicModel : HeartConfigRelatedCellFactory< SPACE_DIM >
mDeformationEnergyParameter : TissueConfig
mDeformationOutputDirectory : CardiacElectroMechanicsProblem< DIM >
mDeformedPosition : AbstractNonlinearElasticityAssembler< DIM >
mDeletedBoundaryElementIndices : MutableMesh< ELEMENT_DIM, SPACE_DIM >
mDeletedElementIndices : MutableMesh< ELEMENT_DIM, SPACE_DIM >
mDeletedNodeIndices : MutableMesh< ELEMENT_DIM, SPACE_DIM > , NodeBasedTissue< DIM >
mDeleteMesh : MeshBasedTissue< DIM >
mDeleteNodes : NodeBasedTissue< DIM >
mDeleteTissue : TissueSimulation< DIM >
mDensity : AbstractNonlinearElasticityAssembler< DIM >
mDestroyMatAndVec : LinearSystem
mDiffusionCoefficient : PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mDimCubed : FourthOrderTensor< DIM >
mDimension : AbstractCellCycleModel
mDimSqd : FourthOrderTensor< DIM >
mDimToFour : FourthOrderTensor< DIM >
mDirectory : OutputFileHandler , Hdf5DataReader , ColumnDataWriter , Hdf5DataWriter
mDirichIterator : AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mDirichletBoundaryConditionsVector : LinearSystem
mDirIsRelativeToChasteTestOutput : ArchiveLocationInfo
mDirPath : ArchiveLocationInfo
mDistMapEndocardium : HeartGeometryInformation< SPACE_DIM >
mDistMapEpicardium : HeartGeometryInformation< SPACE_DIM >
mDistMapLeftVentricle : HeartGeometryInformation< SPACE_DIM >
mDistMapRightVentricle : HeartGeometryInformation< SPACE_DIM >
mDivideTime : AbstractOdeBasedCellCycleModel
mDivisionRestingSpringLength : TissueConfig
mDivisionSeparation : TissueConfig
mDLambdaDt : NhsContractionModel
mDoCacheReplication : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mDomainSize : BoxCollection< DIM >
mDoOneCacheReplication : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mDt : AbstractCardiacCell , NhsModelWithBackwardSolver , TimeStepper , AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , VanLeeuwen2009WntSwatCellCycleOdeSystem , TissueSimulation< DIM >
mDtInverse : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mDu : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDuration : RegularStimulus , SimpleStimulus
mDurationOfSimulation : SimulationTime
mDx : VanLeeuwen2009WntSwatCellCycleOdeSystem
mDy : VanLeeuwen2009WntSwatCellCycleOdeSystem
mE : Mirams2010WntOdeSystem
MechanicsEventType : MechanicsEventHandler
mEdgeIter : MeshBasedTissue< DIM >::SpringIterator
mEdgesVisited : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
mElectricsTimeStep : CardiacElectroMechanicsProblem< DIM >
mElementCounterForParallelMesh : AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
mElementData : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mElementFileDataStart : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mElementIndices : Node< SPACE_DIM >
mElementInverseJacobians : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mElementItemWidth : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mElementIter : AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
mElementJacobianDeterminants : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mElementJacobians : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mElementRawData : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mElements : AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > , VertexMesh< ELEMENT_DIM, SPACE_DIM >
mElementsAndWeights : FineCoarseMeshPair< DIM >
mElementsContained : Box< DIM >
mElementsFile : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
mElementsMapping : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mElementsRead : VertexMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mElementWeightedDirections : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mElemIndex : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
membrane_C : BackwardEulerLuoRudyIModel1991 , DiFrancescoNoble1985OdeSystem , LuoRudyIModel1991OdeSystem
membrane_Cm : HodgkinHuxleySquidAxon1952OriginalOdeSystem , TenTusscher2006OdeSystem
membrane_E_R : HodgkinHuxleySquidAxon1952OriginalOdeSystem
membrane_F : BackwardEulerLuoRudyIModel1991 , LuoRudyIModel1991OdeSystem , TenTusscher2006OdeSystem
membrane_R : BackwardEulerLuoRudyIModel1991 , LuoRudyIModel1991OdeSystem , TenTusscher2006OdeSystem
membrane_T : BackwardEulerLuoRudyIModel1991 , LuoRudyIModel1991OdeSystem , TenTusscher2006OdeSystem
membrane_V_c : TenTusscher2006OdeSystem
MemfemMeshReader() : MemfemMeshReader< ELEMENT_DIM, SPACE_DIM >
mEnabled : GenericEventHandler< NUM_EVENTS, CONCRETE >
mEnd : TimeStepper
mEndoFraction : HeartConfig
mEndoSurface : HeartGeometryInformation< SPACE_DIM >
mEndTime : CardiacElectroMechanicsProblem< DIM > , Electrodes< DIM > , ProgressReporter , SimulationTime , TissueSimulation< DIM >
mEndTimeAndNumberOfTimeStepsSet : SimulationTime
mEofException : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mEpiFraction : HeartConfig
mEpiSurface : HeartGeometryInformation< SPACE_DIM >
mEpsilon : FitzHughNagumo1961OdeSystem
MergeCells() : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
MergeFromArchive() : BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mError : RungeKuttaFehlbergIvpOdeSolver
MeshalyzerMeshWriter() : MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >
MeshBasedTissue() : MeshBasedTissue< DIM >
MeshBasedTissueWithGhostNodes() : MeshBasedTissueWithGhostNodes< DIM >
MeshNum : AbstractUntemplatedConvergenceTester
MetisLibraryNodePartitioning() : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mExtracelluarColumnId : BidomainProblem< DIM >
mExtracellularStimulusCacheReplicated : BidomainPde< SPACE_DIM >
mExtraVariablesId : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mF : Mirams2010WntOdeSystem
mFaceData : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mFaceFileDataStart : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mFaceItemWidth : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mFaceRawData : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mFaces : VertexElement< ELEMENT_DIM, SPACE_DIM > , VertexMesh< ELEMENT_DIM, SPACE_DIM > , VoronoiCell , VoronoiTessellation< DIM >
mFacesFile : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mFacesRead : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mFibreOrientationFilename : AbstractConductivityTensors< SPACE_DIM >
mFibreSheetDirectionsFile : CardiacElectroMechanicsProblem< DIM >
mFieldWidth : ColumnDataReader , ColumnDataWriter
mFileBaseName : AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >
mFileExtension : ColumnDataWriter
mFileFixedDimensionSize : Hdf5DataWriter
mFileId : Hdf5DataReader , Hdf5DataWriter
mFilename1 : NumericFileComparison
mFilename2 : NumericFileComparison
mFilesAreBinary : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >
mFilesBaseName : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
mFileSet : LogFile
mFinalCounter : CmguiDeformedSolutionsWriter< DIM >
mFinishedRunningOdes : AbstractOdeBasedCellCycleModel
mFixedDimensionName : ColumnDataWriter
mFixedDimensionSize : ColumnDataWriter
mFixedDimensionUnits : ColumnDataWriter
mFixedExtracellularPotentialNodes : BidomainProblem< DIM > , BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mFixedNodeDisplacements : AbstractNonlinearElasticityAssembler< DIM >
mFixedNodes : CardiacElectroMechanicsProblem< DIM > , AbstractNonlinearElasticityAssembler< DIM >
mFlag : AbstractElement< ELEMENT_DIM, SPACE_DIM >
mForceCollection : TissueSimulation< DIM >
mForceUseOfNumericalJacobian : BackwardEulerIvpOdeSolver
mFunction : FunctionalBoundaryCondition< SPACE_DIM >
mG1Duration : AbstractCellCycleModel
mG2Duration : TissueConfig , StochasticWntCellCycleModel
mG2PhaseStartTime : AbstractOdeBasedCellCycleModel
mGamma : FitzHughNagumo1961OdeSystem , NhsContractionModel
mGeneration : AbstractSimpleGenerationBasedCellCycleModel
mGhostNodeIndices : HoneycombMeshGenerator
mGroundSecondElectrode : Electrodes< DIM >
mGroupName : CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >
mHaloNodeIndices : DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mHaloNodes : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mHaloNodesMapping : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mHasBath : BidomainProblem< DIM >
mHasBegun : GenericEventHandler< NUM_EVENTS, CONCRETE >
mHasDirichletBCs : AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mHasPutVariable : ColumnDataWriter
mHasUnlimitedDimension : ColumnDataReader
mHepaOneCellG1Duration : TissueConfig
mHepaOneCellHypoxicConcentration : TissueConfig
mHepaOneCellQuiescentConcentration : TissueConfig
mHi : PostProcessingWriter< ELEMENT_DIM, SPACE_DIM > , DistributedVector , DistributedVector::Stripe , DistributedVector::Chunk , DistributedVectorFactory , Hdf5DataWriter , DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mHypothesis : VanLeeuwen2009WntSwatCellCycleOdeSystem
mIdentity : PoleZeroMaterialLaw< DIM > , SchmidCostaExponentialLaw2d
mIExtracellularStimulus : BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
Migrate() : CardiacSimulationArchiver< PROBLEM_CLASS >
mIIntracellularStimulus : BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM > , MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mIionic : BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM > , MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mIionicCacheReplicated : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
MilliSleep() : GenericEventHandler< NUM_EVENTS, CONCRETE >
mImageToLeftOriginalNodeMap : Cylindrical2dMesh
mImageToRightOriginalNodeMap : Cylindrical2dMesh
MIN_NEWTON_ABS_TOL : AbstractNonlinearElasticityAssembler< DIM >
mIncompleteNodeIndices : Hdf5DataReader , Hdf5DataWriter
mIndex : AbstractElement< ELEMENT_DIM, SPACE_DIM > , Node< SPACE_DIM >
mIndexEndo : HeartConfig
mIndexEpi : HeartConfig
mIndexFromZero : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM > , AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
mIndexIterator : Node< SPACE_DIM >::ContainingElementIterator , Node< SPACE_DIM >::ContainingBoundaryElementIterator
mIndexMid : HeartConfig
mInfoFilename : ColumnDataReader
mInitialCondition : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mInitialConditions : AbstractOdeSystemInformation
mInitialGuess : AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
mInitialiseCells : TissueSimulation< DIM >
mInitialised : AbstractConductivityTensors< SPACE_DIM > , GenericEventHandler< NUM_EVENTS, CONCRETE > , AbstractOdeSystemInformation
mInitTime : LogFile
mIntracellularStimulusCacheReplicated : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mInUse : GenericEventHandler< NUM_EVENTS, CONCRETE >
mIonicModelRegions : HeartConfigRelatedCellFactory< SPACE_DIM >
mIonicModelsDefined : HeartConfigRelatedCellFactory< SPACE_DIM >
Mirams2010WntOdeSystem() : Mirams2010WntOdeSystem
mIsActivated : Kerchoffs2003ContractionModel
mIsBoundaryNode : Node< SPACE_DIM >
mIsDataComplete : Hdf5DataReader , Hdf5DataWriter
mIsDead : TissueCell
mIsDeleted : AbstractElement< ELEMENT_DIM, SPACE_DIM > , Node< SPACE_DIM >
mIsFixedDimensionSet : ColumnDataWriter , Hdf5DataWriter
mIsGhostNode : MeshBasedTissueWithGhostNodes< DIM >
mIsInDefineMode : ColumnDataWriter , Hdf5DataWriter
mIsInternalNode : QuadraticMesh< DIM >
mIsLogged : TissueCell
mIsParallel : ParallelColumnDataWriter
mIsUnlimitedDimensionSet : Hdf5DataReader , ColumnDataWriter , Hdf5DataWriter
mIsWatchedLocation : CardiacElectroMechanicsProblem< DIM >
mJ11d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mJ12d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mJ13d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mJ15 : TysonNovak2001OdeSystem
mJ16 : TysonNovak2001OdeSystem
mJ3 : TysonNovak2001OdeSystem
mJ4 : TysonNovak2001OdeSystem
mJ5 : TysonNovak2001OdeSystem
mJ61d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mJ62d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mJ63d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mJ7 : TysonNovak2001OdeSystem
mJ8 : TysonNovak2001OdeSystem
mJacobian : CardiacNewtonSolver< SIZE > , BackwardEulerIvpOdeSolver
mK : PoleZeroMaterialLaw< DIM >
mK1 : NhsContractionModel , TysonNovak2001OdeSystem
mk1 : RungeKuttaFehlbergIvpOdeSolver
mK10 : TysonNovak2001OdeSystem
mK11 : TysonNovak2001OdeSystem
mK12d : TysonNovak2001OdeSystem
mK12dd : TysonNovak2001OdeSystem
mK12ddd : TysonNovak2001OdeSystem
mK13 : TysonNovak2001OdeSystem
mK14 : TysonNovak2001OdeSystem
mK15d : TysonNovak2001OdeSystem
mK15dd : TysonNovak2001OdeSystem
mk16d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mK16d : TysonNovak2001OdeSystem
mK16dd : TysonNovak2001OdeSystem
mK2 : NhsContractionModel
mk2 : RungeKuttaFehlbergIvpOdeSolver
mk23d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mk2d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mK2d : TysonNovak2001OdeSystem
mK2dd : TysonNovak2001OdeSystem
mK2ddd : TysonNovak2001OdeSystem
mk3 : RungeKuttaFehlbergIvpOdeSolver
mk34d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mk3d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mK3d : TysonNovak2001OdeSystem
mK3dd : TysonNovak2001OdeSystem
mK4 : TysonNovak2001OdeSystem
mk4 : RungeKuttaFehlbergIvpOdeSolver
mk43d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mK4d : TysonNovak2001OdeSystem
mk5 : RungeKuttaFehlbergIvpOdeSolver
mK5d : TysonNovak2001OdeSystem
mK5dd : TysonNovak2001OdeSystem
mK6 : TysonNovak2001OdeSystem
mk6 : RungeKuttaFehlbergIvpOdeSolver
mk61d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mK7 : TysonNovak2001OdeSystem
mK8 : TysonNovak2001OdeSystem
mK9 : TysonNovak2001OdeSystem
mKc : VanLeeuwen2009WntSwatCellCycleOdeSystem
mKd : VanLeeuwen2009WntSwatCellCycleOdeSystem
mKeq : TysonNovak2001OdeSystem
mKm1d : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mKon : NhsContractionModel
mkpd : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mKrefoff : NhsContractionModel
mKspIsSetup : LinearSystem
mKspSolver : LinearSystem
mKspType : LinearSystem
mKt : VanLeeuwen2009WntSwatCellCycleOdeSystem
mKZ : NhsContractionModel
mLambda : NhsContractionModel
mLastNeumannCondition : BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mLastPercentage : ProgressReporter
mLastTime : SingleOdeWntCellCycleModel , AbstractOdeBasedCellCycleModel
mLayerForEachNode : HeartGeometryInformation< SPACE_DIM >
mLeftElectrodeArea : Electrodes< DIM >
mLeftImages : Cylindrical2dMesh
mLeftOriginals : Cylindrical2dMesh
mLeftPeriodicBoundaryElementIndices : Cylindrical2dMesh
mLevel : LogFile
mLevels : RampedQuarterStimulusCellFactory< CELL, DIM >
mLhsMatrix : LinearSystem
mLinearSolverRelativeTolerance : SimpleNewtonNonlinearSolver
mListOfNodes : ChasteNodesList< SPACE_DIM >
mLo : PostProcessingWriter< ELEMENT_DIM, SPACE_DIM > , DistributedVector , DistributedVector::Stripe , DistributedVector::Chunk , DistributedVectorFactory , Hdf5DataWriter , DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mLoadableModulePath : DynamicCellModelLoader
mLoadedFromArchive : BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mLoaders : DynamicModelLoaderRegistry
mLocalBoxes : BoxCollection< DIM >
mLocation : ChastePoint< DIM > , Node< SPACE_DIM >
mLocationCellMap : AbstractTissue< DIM >
mLocationIndices : VoronoiTessellation< DIM >
mLowerCorner : ChasteCuboid< SPACE_DIM >
mLVSurface : HeartGeometryInformation< SPACE_DIM >
mMad : TysonNovak2001OdeSystem
mMagnitudeOfStimulus : RegularStimulus , SimpleStimulus
mMap : NodeMap , VertexElementMap
mMarkedSprings : MeshBasedTissue< DIM >
mMaterialLaws : AbstractNonlinearElasticityAssembler< DIM >
mMatNullSpace : LinearSystem
mMatrixIsAssembled : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mMatrixIsConstant : LinearSystem , AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , AbstractLinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
mMatureCellTargetArea : TissueConfig
mMaxCellId : TissueCell
mMaxFaceBdyMarker : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mMaxLoggingLevel : LogFile
mMaxNodeBdyMarker : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mMaxNumNonzerosIfMatMpiAij : PetscTools
mMaxSpatialPositions : NodeBasedTissue< DIM >
mMaxTransitGenerations : TissueConfig
mMaxUpstrokeVelocities : CellProperties
mMaxValuesFine : FineCoarseMeshPair< DIM >
mMDuration : TissueConfig
mMechanicsCutOffLength : TissueConfig
mMechanicsTimeStep : CardiacElectroMechanicsProblem< DIM >
mMembraneSurfaceEnergyParameter : TissueConfig
mMeshChangesDuringSimulation : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
mMeshFileBaseName : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
mMeshFilename : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , ArchiveLocationInfo , HoneycombMeshGenerator
mMeshIsHexahedral : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mMeshIsLinear : AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mMeshUnarchived : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mMeshWidth : RampedQuarterStimulusCellFactory< CELL, DIM > , AbstractUntemplatedConvergenceTester , CuboidMeshConstructor< ELEMENT_DIM, SPACE_DIM >
mMessage : Exception
mMetisPartitioning : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mMidFraction : HeartConfig
mMinAndMaxValues : Box< DIM >
mMinimumGapDuration : TissueConfig
mMinSpatialPositions : NodeBasedTissue< DIM >
mMinValuesFine : FineCoarseMeshPair< DIM >
mMstar : TysonNovak2001OdeSystem
mMu : TysonNovak2001OdeSystem
mMutantMutantMultiplier : LinearSpringWithVariableSpringConstantsForce< DIM >
mMutationStates : CellMutationStateRegistry
mN : NhsContractionModel , PolynomialMaterialLaw3d , TysonNovak2001OdeSystem
mNeedAdvanceAlongUnlimitedDimension : ColumnDataWriter
mNeedExtend : Hdf5DataWriter
mNextTime : AbstractCardiacMechanicsAssembler< DIM > , TimeStepper
mNoBirth : TissueSimulation< DIM >
mNodeALocalIndex : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
mNodeBLocalIndex : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
mNodeColumnId : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mNodeCounterForParallelMesh : AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
mNodeData : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodeFileDataStart : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodeItemWidth : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodeIter : AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
mNodeMapCurrentIndex : VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
mNodePairs : NodeBasedTissue< DIM >
mNodeRawData : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodes : AbstractElement< ELEMENT_DIM, SPACE_DIM > , AbstractMesh< ELEMENT_DIM, SPACE_DIM > , NodeBasedTissue< DIM >
mNodesContained : Box< DIM >
mNodesFile : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodesMapping : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mNodesPerBoundaryElement : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodesPerElement : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
mNodesPermutation : AbstractMesh< ELEMENT_DIM, SPACE_DIM >
mNodesRead : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
mNodesToOutput : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mNoElectricsOutput : CardiacElectroMechanicsProblem< DIM >
mNonZerosUsed : LinearSystem
mNormalMutantMultiplier : LinearSpringWithVariableSpringConstantsForce< DIM >
mNotInMesh : FineCoarseMeshPair< DIM >
mNotInMeshNearestElementWeights : FineCoarseMeshPair< DIM >
mNr : NhsContractionModel
mNullSpaceCreated : BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mNumberOfNodes : PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mNumberOfStateVariables : AbstractOdeSystem
mNumberOfSurfacesProvided : HeartGeometryInformation< SPACE_DIM >
mNumberOfTimeSteps : OdeSolution
mNumberOfVariables : CellwiseData< DIM >
mNumberOwned : Hdf5DataWriter
mNumberTimesteps : Hdf5DataReader
mNumBirths : TissueSimulation< DIM >
mNumBoxesEachDirection : BoxCollection< DIM >
mNumCellLength : HoneycombMeshGenerator
mNumCellWidth : HoneycombMeshGenerator
mNumDeaths : TissueSimulation< DIM >
mNumDofs : AbstractNonlinearElasticityAssembler< DIM >
mNumElecTimestepsPerMechTimestep : CardiacElectroMechanicsProblem< DIM >
mNumElementAttributes : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
mNumElementNodes : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mNumElements : AbstractConductivityTensors< SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , CuboidMeshConstructor< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM > , AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM > , QuadraturePointsGroup< DIM >
mNumericalJacobianEpsilon : BackwardEulerIvpOdeSolver
mNumFaceAttributes : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mNumFaces : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mNumFixedDimensions : ColumnDataReader
mNumHalosPerProcess : DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mNumNewtonIterations : AbstractNonlinearElasticityAssembler< DIM >
mNumNodeAttributes : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
mNumNodes : CuboidMeshConstructor< ELEMENT_DIM, SPACE_DIM > , TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > , DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM > , VertexMeshReader< ELEMENT_DIM, SPACE_DIM > , AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
mNumProcessors : PetscTools
mNumProcs : DistributedVectorFactory
mNumQuadPoints : GaussianQuadratureRule< ELEMENT_DIM >
mNumQuadPointsPerElement : QuadraturePointsGroup< DIM >
mNumTimeSteps : PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mNumVariables : AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM > , ColumnDataReader
mNumVertices : QuadraticMesh< DIM >
MockEulerIvpOdeSolver() : MockEulerIvpOdeSolver
mOdeSystems : CombinedOdeSystem
mOdeTimestep : AbstractCardiacMechanicsAssembler< DIM >
mOffset : DistributedVector::Chunk , Hdf5DataWriter
mOffsets : CombinedOdeSystem
mOneDimBoundary : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
MonodomainDg0Assembler() : MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
MonodomainMatrixBasedAssembler() : MonodomainMatrixBasedAssembler< ELEMENT_DIM, SPACE_DIM >
MonodomainPde() : MonodomainPde< ELEMENT_DIM, SPACE_DIM >
MonodomainProblem() : MonodomainProblem< ELEMENT_DIM, SPACE_DIM >
MonodomainRhsMatrixAssembler() : MonodomainRhsMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
mOnsets : CellProperties
MooneyRivlinMaterialLaw() : MooneyRivlinMaterialLaw< DIM >
mOption : NonPhysiologicalContractionModel
mOrderingHasBeenSpecified : CellMutationStateRegistry
mOrderOfBoundaryElements : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mOrderOfElements : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mOrientations : VoronoiCell , VertexElement< ELEMENT_DIM, SPACE_DIM >
mOutputCellAges : TissueConfig
mOutputCellAncestors : TissueConfig
mOutputCellAreas : TissueConfig
mOutputCellCyclePhases : TissueConfig
mOutputCellIdData : TissueConfig
mOutputCellMutationStates : TissueConfig
mOutputCellProliferativeTypes : TissueConfig
mOutputCellVariables : TissueConfig
mOutputDirectory : CardiacElectroMechanicsProblem< DIM > , AbstractNonlinearElasticityAssembler< DIM > , TissueSimulation< DIM >
mOutputFileHandler : ColumnDataWriter
mOutputNodeVelocities : TissueConfig
mOutputTissueAreas : TissueConfig
mOutputVoronoiData : TissueConfig
MoveMergeNode() : MutableMesh< ELEMENT_DIM, SPACE_DIM >
mOwnership : AbstractElement< ELEMENT_DIM, SPACE_DIM >
mOwnershipRangeHi : LinearSystem
mOwnershipRangeLo : LinearSystem
mParameterNames : AbstractOdeSystemInformation
mParameters : AbstractOdeSystem
mParameterUnits : AbstractOdeSystemInformation
mpArchive() : ProcessSpecificArchive< Archive >
mpAssembler : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , BidomainProblem< DIM >
mpBidomainPde : BidomainProblem< DIM > , BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mpBidomainRhsMatrixAssembler : BidomainMatrixBasedAssembler< ELEMENT_DIM, SPACE_DIM >
mpBidomainWithBathRhsMatrixAssembler : BidomainWithBathMatrixBasedAssembler< ELEMENT_DIM, SPACE_DIM >
mpBlockDiagonalPC : LinearSystem
mpBodyForceFunction : AbstractNonlinearElasticityAssembler< DIM >
mpBoundaryConditions : AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpBoundaryConditionsContainer : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , Electrodes< DIM >
mpBoundaryNodesFile : AbstractTissue< DIM >
mpBoundaryQuadratureRule : NonlinearElasticityAssembler< DIM >
mpBoxCollection : NodeBasedTissue< DIM >
mPc : VanLeeuwen2009WntSwatCellCycleOdeSystem
mpCalculator : PostProcessingWriter< ELEMENT_DIM, SPACE_DIM >
mpCardiacMechAssembler : CardiacElectroMechanicsProblem< DIM >
mpCardiacPde : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mPCContext : PCBlockDiagonal , PCLDUFactorisation
mpCell : AbstractCellCycleModel
mpCellAgesFile : AbstractTissue< DIM >
mpCellAncestorsFile : AbstractTissue< DIM >
mpCellAreasFile : MeshBasedTissue< DIM >
mpCellCycleModel : TissueCell
mpCellCyclePhasesFile : AbstractTissue< DIM >
mpCellFactory : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpCellIdFile : AbstractTissue< DIM >
mpCellMutationStatesFile : AbstractTissue< DIM >
mpCellProliferativeTypesFile : AbstractTissue< DIM >
mpCellVariablesFile : AbstractTissue< DIM >
mpChangeOfBasisMatrix : PoleZeroMaterialLaw< DIM > , SchmidCostaExponentialLaw2d
mpCommonArchive : ArchiveOpener< Archive, Stream >
mpCommonStream : ArchiveOpener< Archive, Stream >
mpConfig : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM > , BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM > , TissueSimulation< DIM > , MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mpCreationFunction : DynamicCellModelLoader
mPcType : LinearSystem
mpCurrentAncillaryFile : ColumnDataWriter
mpCurrentOutputFile : ColumnDataWriter
mpData : ReplicatableVector
mpDataReader : PostProcessingWriter< ELEMENT_DIM, SPACE_DIM > , PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , PropagationPropertiesCalculator
mpDefaultBoundaryConditionsContainer : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpDefaultParameters : HeartConfig
mpDirichletMap : AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpDistributedVectorFactory : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM > , AbstractMesh< ELEMENT_DIM, SPACE_DIM >
mpDynamicModule : DynamicCellModelLoader
mPeakValues : CellProperties
mpElectricsMesh : CardiacElectroMechanicsProblem< DIM >
mpElectrodes : BidomainProblem< DIM >
mpElementFile : MeshBasedTissue< DIM >
mpElementIterator : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mpEllipticPde : SimpleLinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM, CONCRETE >
mPeriod : RegularStimulus
mPetscIsInitialised : PetscTools
mPetscPCObject : PCLDUFactorisation , PCBlockDiagonal
mPetscStatusKnown : DistributedVectorFactory
mpExtracellularConductivityTensors : BidomainPde< SPACE_DIM >
mpFaceIterator : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mpFactory : DistributedVector , DistributedVector::Stripe
mpFakeCell : AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM >
mpFile : ProgressReporter
mpFile1 : NumericFileComparison
mpFile2 : NumericFileComparison
mpFineMeshBoxCollection : FineCoarseMeshPair< DIM >
mpFixedDimensionVariable : ColumnDataWriter
mpGeometryInfo : StreeterFibreGenerator< SPACE_DIM >
mpHeartGeometryInformation : AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM >
mphi_i : WntCellCycleOdeSystem , VanLeeuwen2009WntSwatCellCycleOdeSystem
mphi_j : WntCellCycleOdeSystem , VanLeeuwen2009WntSwatCellCycleOdeSystem
mphi_p : WntCellCycleOdeSystem , VanLeeuwen2009WntSwatCellCycleOdeSystem
mphi_r : WntCellCycleOdeSystem , VanLeeuwen2009WntSwatCellCycleOdeSystem
mPhiE2F1 : VanLeeuwen2009WntSwatCellCycleOdeSystem , WntCellCycleOdeSystem
mpInstance : CellMutationStateRegistry , SimulationTime , BackwardEulerTenTusscher2006_LookupTables , DynamicModelLoaderRegistry , Cellluo_rudy_1991FromCellMLOpt_LookupTables , CML_luo_rudy_1991_pe_lut_be_LookupTables , FaberRudy2000Version3OptimisedLookupTables , LogFile , OdeSystemInformation< ODE_SYSTEM > , TissueConfig , RandomNumberGenerator , CML_noble_varghese_kohl_noble_1998_basic_pe_lut_LookupTables , HeartConfig , WntConcentration< DIM > , CommandLineArguments , CellwiseData< DIM >
mpIntracellularConductivityTensors : AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mpIntracellularStimulus : AbstractCardiacCell
mpIters : AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM > , VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
mpLDUFactorisationPC : LinearSystem
mpLinearSystem : AbstractNonlinearElasticityAssembler< DIM > , AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
mpLoader : AbstractDynamicallyLoadableEntity
mpMatrixForMatrixBasedRhsAssembly : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpMechanicsMesh : CardiacElectroMechanicsProblem< DIM >
mpMesh : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , Electrodes< DIM > , AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE > , AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM > , AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM > , AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > , HoneycombVertexMeshGenerator , VertexMeshWriter< ELEMENT_DIM, SPACE_DIM > , AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM > , HoneycombMeshGenerator , HeartGeometryInformation< SPACE_DIM >
mpMeshPair : CardiacElectroMechanicsProblem< DIM >
mpMeshReader : AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
mpMonodomainPde : MonodomainProblem< ELEMENT_DIM, SPACE_DIM > , MonodomainDg0Assembler< ELEMENT_DIM, SPACE_DIM >
mpMonodomainProblem : CardiacElectroMechanicsProblem< DIM >
mpMonodomainRhsMatrixAssembler : MonodomainMatrixBasedAssembler< ELEMENT_DIM, SPACE_DIM >
mpMutationState : WntCellCycleOdeSystem , TissueCell , Mirams2010WntOdeSystem , VanLeeuwen2009WntSwatCellCycleOdeSystem
mpMutationStateRegistry : AbstractTissue< DIM >
mpNeumannMap : BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpNodeIterator : AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
mpNodeMap : AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM > , VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
mpNodeVelocitiesFile : TissueSimulation< DIM >
mpNonConstantConductivities : AbstractConductivityTensors< SPACE_DIM >
mpNonlinearEllipticPde : SimpleNonlinearEllipticAssembler< ELEMENT_DIM, SPACE_DIM >
mpOdeSolver : AbstractCardiacCell
mpOdeSystem : AbstractOdeBasedCellCycleModel , SingleOdeWntCellCycleModel
mpOdeSystemInformation : OdeSolution
mPoints : GaussianQuadratureRule< ELEMENT_DIM >
mpOriginalFactory : DistributedVectorFactory
mpOutputFileHandler : InventorVoronoiWriter , AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM > , AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
mpOutStream : LogFile
mpParabolicPde : SimpleDg0ParabolicAssembler< ELEMENT_DIM, SPACE_DIM, NON_HEART, CONCRETE >
mpParallelMesh : AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
mpPreconditionMatrixLinearSystem : AbstractNonlinearElasticityAssembler< DIM >
mpPrivateArchive : ArchiveOpener< Archive, Stream >
mpPrivateStream : ArchiveOpener< Archive, Stream >
mpQuadMesh : NonlinearElasticityAssembler< DIM >
mpQuadraticMesh : CmguiDeformedSolutionsWriter< DIM >
mpQuadratureRule : NonlinearElasticityAssembler< DIM >
mpQuadRule : AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
mpRandomGenerator : TissueSimulation< DIM >
mpReader : AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >
mPrecision : ColumnDataWriter , LogFile
mPressures : AbstractNonlinearElasticityAssembler< DIM >
mPrintOutput : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mProbabilityOfDeathInAnHour : RandomCellKiller< DIM >
mProbeElectrode : PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mProblemSize : DistributedVectorFactory , DistributedVector
mpSetupFile : TissueSimulation< DIM >
mpSolver : AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > , AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
mpStaticCastTissue : CryptSimulation1d , CryptSimulation2d
mpStimuli : RampedQuarterStimulusCellFactory< CELL, DIM >
mpStimulus : PlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM > , BathCellFactory< DIM > , StimulusBoundaryCondition< SPACE_DIM >
mpSurfaceQuadRule : AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, CONCRETE >
mpSystemInfo : AbstractOdeSystem
mpTissue : WntConcentration< DIM > , CellwiseData< DIM > , AbstractCellKiller< SPACE_DIM >
mpTissueAreasFile : MeshBasedTissue< DIM >
mpTissueConfig : WntConcentration< DIM >
mpTractionBoundaryConditionFunction : AbstractNonlinearElasticityAssembler< DIM >
mPu : VanLeeuwen2009WntSwatCellCycleOdeSystem
mpUnlimitedDimensionVariable : ColumnDataWriter
mpUserParameters : HeartConfig
mpVariableFibreSheetDirections : AbstractCardiacMechanicsAssembler< DIM >
mpVec : DistributedVector::Chunk , DistributedVector , DistributedVector::Stripe
mpVizCellProliferativeTypesFile : AbstractTissue< DIM >
mpVizNodesFile : AbstractTissue< DIM >
mpVoronoiFile : MeshBasedTissue< DIM >
mpVoronoiTessellation : MeshBasedTissue< DIM >
mpWatchedLocationFile : CardiacElectroMechanicsProblem< DIM >
mpWriter : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpZeroBoundaryCondition : BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mpZeroStimulus : AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM >
mQueue : OutputDirectoryFifoQueue
mQueueMaxSize : OutputDirectoryFifoQueue
mRadiusVectors : PapillaryFibreCalculator
mRank : PetscTools
mrCoarseMesh : FineCoarseMeshPair< DIM >
mrCrypt : AbstractCryptStatistics
mReadContainingElementOfBoundaryElement : TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
mReadyToDivide : AbstractCellCycleModel
mRegion : AbstractElement< ELEMENT_DIM, SPACE_DIM > , Node< SPACE_DIM >
mReplicated : ReplicatableVector
mResidual : BackwardEulerIvpOdeSolver , CardiacNewtonSolver< SIZE >
mRestingValues : CellProperties
mrFineMesh : FineCoarseMeshPair< DIM >
mRhsVector : LinearSystem
mRightElectrodeArea : Electrodes< DIM >
mRightImages : Cylindrical2dMesh
mRightOriginals : Cylindrical2dMesh
mRightPeriodicBoundaryElementIndices : Cylindrical2dMesh
mrMesh : TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator , MeshBasedTissue< DIM > , PostProcessingWriter< ELEMENT_DIM, SPACE_DIM > , PapillaryFibreCalculator , VoronoiTessellation< DIM > , StreeterFibreGenerator< SPACE_DIM > , VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator , AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator , PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mRoundCounter : DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mRowForAverageOfPhiZeroed : BidomainDg0Assembler< ELEMENT_DIM, SPACE_DIM > , BidomainProblem< DIM >
mRowStartPosition : ColumnDataWriter
mRowWidth : ColumnDataWriter
mrTime : CellProperties
mrTissue : TissueSimulation< DIM > , AbstractTissue< DIM >::Iterator , MeshBasedTissue< DIM >::SpringIterator
mrVectorFactory : Hdf5DataWriter
mrVoltage : CellProperties
mRVSurface : HeartGeometryInformation< SPACE_DIM >
mSa : VanLeeuwen2009WntSwatCellCycleOdeSystem
mSamplingTimestepMultiple : TissueSimulation< DIM >
mSarcomereLength : Kerchoffs2003ContractionModel
mSc : VanLeeuwen2009WntSwatCellCycleOdeSystem
mSca : VanLeeuwen2009WntSwatCellCycleOdeSystem
mScaledVoltage : Nash2004ContractionModel
mScaleFactorAch : Maleckar2009OdeSystem
mScaleFactorAZD : Maleckar2009OdeSystem
mScaleFactorGCaL : Maleckar2009OdeSystem
mScaleFactorGK1 : Maleckar2009OdeSystem
mScaleFactorGkr : FaberRudy2000Version3 , Mahajan2008OdeSystem , TenTusscher2006OdeSystem , Maleckar2009OdeSystem , HeartConfigRelatedCellFactory< SPACE_DIM >
mScaleFactorGks : Maleckar2009OdeSystem , HeartConfigRelatedCellFactory< SPACE_DIM > , TenTusscher2006OdeSystem , Mahajan2008OdeSystem , FaberRudy2000Version3
mScaleFactorGKur : Maleckar2009OdeSystem
mScaleFactorGna : Maleckar2009OdeSystem
mScaleFactorGNaCa : Maleckar2009OdeSystem
mScaleFactorGNaK : Maleckar2009OdeSystem
mScaleFactorIto : HeartConfigRelatedCellFactory< SPACE_DIM > , FaberRudy2000Version3 , Maleckar2009OdeSystem , TenTusscher2006OdeSystem , Mahajan2008OdeSystem
msCheckNumberOfProcessesOnLoad : DistributedVectorFactory
mSchemaLocations : HeartConfig
mSct : VanLeeuwen2009WntSwatCellCycleOdeSystem
mSd : VanLeeuwen2009WntSwatCellCycleOdeSystem
mSDuration : TissueConfig
mSeed : RandomNumberGenerator
mSetVoltageDerivativeToZero : AbstractCardiacCell
mShortMessage : Exception
mSimulationOutputDirectory : TissueSimulation< DIM >
msInstances : CombinedOdeSystemInformation
mSize : LinearSystem , ReplicatableVector
mSizeMultiplier : DistributedVector
mSizeOfOdeSystem : BackwardEulerIvpOdeSolver
mSkipDeletedElements : VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator , AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator
mSkipDeletedNodes : AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
mSloughSides : SloughingCellKiller< DIM >
mSmoothedStructureTensors : PapillaryFibreCalculator
mSolution : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mSolutionReplicated : AbstractFunctionalCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mSolutions : OdeSolution
mSpringStiffness : TissueConfig
mSpringsVisited : MeshBasedTissue< DIM >::SpringIterator
msSolver : AbstractWntOdeBasedCellCycleModel , TysonNovakCellCycleModel , SingleOdeWntCellCycleModel
mSt : VanLeeuwen2009WntSwatCellCycleOdeSystem
mStart : TimeStepper
mStartOfApoptosisTime : TissueCell
mStartTime : ProgressReporter , RegularStimulus , SimulationTime , Electrodes< DIM >
mStartTimeSet : SimulationTime
mStateVariables : AbstractOdeSystem
mStemCellG1Duration : TissueConfig
mStepSize : RampedQuarterStimulusCellFactory< CELL, DIM >
mStimulatedAreas : HeartConfigRelatedCellFactory< SPACE_DIM >
mStimulatedPoint : BathCellFactory< DIM >
mStimuli : MultiStimulus
mStimuliApplied : HeartConfigRelatedCellFactory< SPACE_DIM >
mStoppingEventOccurred : AbstractIvpOdeSolver
mStoppingTime : AbstractIvpOdeSolver
mStopTime : RegularStimulus
mStretch : NonPhysiologicalContractionModel
mStretches : AbstractCardiacMechanicsAssembler< DIM >
mStretchesLastTimeStep : ImplicitCardiacMechanicsAssembler< DIM >
mStride : DistributedVector::Stripe , AbstractCardiacPde< ELEMENT_DIM, SPACE_DIM >
mStripe : DistributedVector::Stripe
mStructureTensors : PapillaryFibreCalculator
mSurfaceTractions : AbstractNonlinearElasticityAssembler< DIM >
mSx : VanLeeuwen2009WntSwatCellCycleOdeSystem
mSy : VanLeeuwen2009WntSwatCellCycleOdeSystem
mSymmetricDivisionProbability : TissueConfig
mTemporaryStateVariables : AbstractOdeBasedContractionModel
mTend : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mTensors : AbstractConductivityTensors< SPACE_DIM >
mTestDampingValues : SimpleNewtonNonlinearSolver
mThreshold : CellProperties
mTime : AbstractOdeBasedContractionModel , TimeStepper , PdeSimulationTime , AbstractAlgebraicContractionModel
mTimeColumnId : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mTimeDatasetId : Hdf5DataReader , Hdf5DataWriter
mTimeOfStimulus : SimpleStimulus
mTimes : OdeSolution
mTimesAtMaxUpstrokeVelocity : CellProperties
mTimesCalled : RandomNumberGenerator
mTimesSet : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mTimeStepsElapsed : SimulationTime
mTissueContainsMesh : AbstractTissue< DIM >
mToAll : ReplicatableVector
mTolerance : SimpleNewtonNonlinearSolver , LinearSystem , NhsModelWithBackwardSolver
mToMaster : ParallelColumnDataWriter
mTop : HoneycombMeshGenerator , Cylindrical2dMesh
mTopHaloNodes : Cylindrical2dMesh
mTotalNumBoundaryElements : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mTotalNumElements : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mTotalNumNodes : DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
mTotalQuadPoints : AbstractCardiacMechanicsAssembler< DIM >
mTotalTimeStepsInSimulation : SimulationTime
mTotalTimeStepsTaken : TimeStepper
mTransitCellG1Duration : TissueConfig
mTref : NhsContractionModel
mTstart : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mTypeSet : WntConcentration< DIM >
mUndergoingApoptosis : TissueCell
mUnicodeForm : XStr
mUnlimitedDimensionName : ColumnDataWriter , Hdf5DataWriter
mUnlimitedDimensionPosition : ColumnDataWriter
mUnlimitedDimensionUnit : Hdf5DataWriter
mUnlimitedDimensionUnits : ColumnDataWriter
mUpdate : BackwardEulerIvpOdeSolver , CardiacNewtonSolver< SIZE >
mUpdateTissue : TissueSimulation< DIM >
mUpperCorner : ChasteCuboid< SPACE_DIM >
mUseAbsoluteTolerance : LinearSystem
mUseAnalyticalJacobian : AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
mUseAnalyticJacobian : AbstractOdeSystem
mUseApoptoticSprings : LinearSpringWithVariableSpringConstantsForce< DIM >
mUseAreaBasedDampingConstant : MeshBasedTissue< DIM >
mUseBCatSprings : LinearSpringWithVariableSpringConstantsForce< DIM >
mUseCellProliferativeTypeDependentG1Duration : SimpleWntCellCycleModel
mUseConstantDataForTesting : CellwiseData< DIM >
mUseConstantWntValueForTesting : WntConcentration< DIM >
mUseCutoffPoint : AbstractTwoBodyInteractionForce< DIM >
mUseEdgeBasedSpringConstant : LinearSpringWithVariableSpringConstantsForce< DIM >
mUseFibreOrientation : AbstractConductivityTensors< SPACE_DIM >
mUseFixedSchemaLocation : HeartConfig
mUseJiggledBottomCells : CryptSimulation2d
mUseMatrixBasedRhsAssembly : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > , AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mUseMutantSprings : LinearSpringWithVariableSpringConstantsForce< DIM >
mUseNonConstantConductivities : AbstractConductivityTensors< SPACE_DIM >
mUserAskedForCellularTransmuralHeterogeneities : HeartConfig
mUserAskedForCuboidsForCellularHeterogeneities : HeartConfig
mUsingBodyForceFunction : AbstractNonlinearElasticityAssembler< DIM >
mUsingTractionBoundaryConditionFunction : AbstractNonlinearElasticityAssembler< DIM >
MutableMesh() : MutableMesh< ELEMENT_DIM, SPACE_DIM >
mValue : ConstBoundaryCondition< SPACE_DIM >
mValues : ColumnDataReader
mVariableName : DataWriterVariable , PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mVariableNames : Hdf5DataReader , AbstractOdeSystemInformation
mVariableParameterMaps : CombinedOdeSystem
mVariables : ColumnDataWriter , Hdf5DataWriter
mVariablesDatasetId : Hdf5DataReader
mVariablesDatasetRank : Hdf5DataReader
mVariablesDatasetSizes : Hdf5DataReader
mVariablesToColumns : ColumnDataReader
mVariablesToUnits : ColumnDataReader
mVariableToColumnIndex : Hdf5DataReader
mVariableToUnit : Hdf5DataReader
mVariableUnits : AbstractOdeSystemInformation , DataWriterVariable
mVariesWithFixedDimension : DataWriterVariable
mVariesWithUnlimitedDimension : DataWriterVariable
mVec : DistributedVector
mVectorForMatrixBasedRhsAssembly : AbstractDynamicAssemblerMixin< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mVertices : VoronoiTessellation< DIM > , Face< DIM >
mVoltageColumnId : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mVoltageIndex : AbstractCardiacCell
mVoltageName : PropagationPropertiesCalculator
mVoronoiCells : VoronoiTessellation< DIM >
mWatchedElectricsNodeIndex : CardiacElectroMechanicsProblem< DIM >
mWatchedLocation : CardiacElectroMechanicsProblem< DIM >
mWatchedMechanicsNodeIndex : CardiacElectroMechanicsProblem< DIM >
mWeAllocatedSolverMemory : AbstractNonlinearAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CONCRETE >
mWeights : GaussianQuadratureRule< ELEMENT_DIM >
mWelikyOsterAreaParameter : TissueConfig
mWelikyOsterPerimeterParameter : TissueConfig
mWidth : Cylindrical2dMesh
mWntChemotaxisStrength : TissueConfig
mWntConcentrationParameter : TissueConfig
mWntLabelledThreshold : TissueConfig
mWntStemThreshold : TissueConfig
mWntTransitThreshold : TissueConfig
mWntType : WntConcentration< DIM >
mWorkingDerivs : CombinedOdeSystem
mWorkingMemory : AbstractOneStepIvpOdeSolver
mWorkingStateVars : CombinedOdeSystem
mWorkOnEntireMesh : DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
mWriteInfo : AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
mWriteMetaFile : AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
mWriteOutput : CardiacElectroMechanicsProblem< DIM > , AbstractNonlinearElasticityAssembler< DIM >
mWriteStats : SimpleNewtonNonlinearSolver
mXiC : VanLeeuwen2009WntSwatCellCycleOdeSystem
mXiD : VanLeeuwen2009WntSwatCellCycleOdeSystem
mXiDx : VanLeeuwen2009WntSwatCellCycleOdeSystem
mXiX : VanLeeuwen2009WntSwatCellCycleOdeSystem
myk2 : RungeKuttaFehlbergIvpOdeSolver
myk3 : RungeKuttaFehlbergIvpOdeSolver
myk4 : RungeKuttaFehlbergIvpOdeSolver
myk5 : RungeKuttaFehlbergIvpOdeSolver
myk6 : RungeKuttaFehlbergIvpOdeSolver
mZp : NhsContractionModel