Class Index

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A	ApcOneHitCellMutationState	DistributedVector::Chunk	MechanicsEventHandler	RungeKuttaFehlbergIvpOdeSolver
	ApcTwoHitCellMutationState	Node::ContainingBoundaryElementIterator	MemfemMeshReader	S
AbstractAlgebraicContractionModel	ApoptoticCellKiller	Node::ContainingElementIterator	MeshalyzerMeshWriter
AbstractAssemblerSolverHybrid	ApoptoticCellProperty	D	MeshBasedCellPopulation	DistributedVector::Stripe
AbstractBackwardEulerCardiacCell	ArchiveLocationInfo		MeshBasedCellPopulationWithGhostNodes	MeshBasedCellPopulation::SpringIterator
AbstractBackwardEulerCardiacCell< 0u >	ArchiveOpener	DataAtQuadraturePoint_	MeshEventHandler	S1S2Stimulus
AbstractBidomainSolver	AveragedSourceEllipticPde	DataWriterVariable	MeshPottsWriterIterators	SchmidCostaExponentialLaw2d
AbstractBoundaryCondition	AveragedSourceParabolicPde	DefaultCellProliferativeType	MeshWriterIterators	SerializableSingleton
AbstractBoundaryConditionsContainer	AxisymmetricConductivityTensors	DeltaNotchOdeSystem	Mirams2010WntOdeSystem	ShortAxisVertexBasedDivisionRule
AbstractBoxDomainPdeModifier	B	DeltaNotchSrnModel	MixedDimensionMesh	ShovingCaBasedDivisionRule
AbstractCaBasedDivisionRule		DeltaNotchTrackingModifier	MockEulerIvpOdeSolver	SimpleDataWriter
AbstractCachedMeshReader	BackwardEulerIvpOdeSolver	DifferentialAdhesionGeneralisedLinearSpringForce	MonodomainAssembler	SimpleLinearEllipticSolver
AbstractCardiacCell	BathCellFactory	DifferentialAdhesionPottsUpdateRule	MonodomainCorrectionTermAssembler	SimpleLinearParabolicSolver
AbstractCardiacCellFactory	BernoulliTrialCellCycleModel	DifferentiatedCellProliferativeType	MonodomainProblem	SimpleNewtonNonlinearSolver
AbstractCardiacCellInterface	BetaCateninOneHitCellMutationState	DiffusionCaUpdateRule	MonodomainPurkinjeCableAssembler	SimpleNonlinearEllipticSolver
AbstractCardiacCellWithModifiers	BidomainAssembler	DiffusionForce	MonodomainPurkinjeCableMassMatrixAssembler	SimpleOxygenBasedCellCycleModel
AbstractCardiacFeVolumeIntegralAssembler	BidomainCorrectionTermAssembler	DiscreteSystemForceCalculator	MonodomainPurkinjeProblem	SimplePetscNonlinearSolver
AbstractCardiacMechanicsSolver	BidomainMassMatrixAssembler	DistanceMapCalculator	MonodomainPurkinjeSolver	SimpleStimulus
AbstractCardiacMechanicsSolverInterface	BidomainNeumannSurfaceTermAssembler	DistributedBoxCollection	MonodomainPurkinjeVolumeAssembler	SimpleTargetAreaModifier
AbstractCardiacProblem	BidomainProblem	DistributedQuadraticMesh	MonodomainPurkinjeVolumeMassMatrixAssembler	SimpleWntCellCycleModel
AbstractCardiacTissue	BidomainSolver	DistributedTetrahedralMesh	MonodomainSolver	SimulationTime
AbstractCaSwitchingUpdateRule	BidomainTissue	DistributedTetrahedralMeshPartitionType	MonodomainStiffnessMatrixAssembler	SingleOdeWntCellCycleModel
AbstractCaUpdateRule	BidomainWithBathAssembler	DistributedVector	MonodomainTissue	SingleTraceOutputModifier
AbstractCellBasedSimulation	BidomainWithBathProblem	DistributedVectorException	MooneyRivlinMaterialLaw	SloughingCellKiller
AbstractCellBasedSimulationModifier	BoundaryConditionsContainer	DistributedVectorFactory	MultiStimulus	SolidMechanicsProblemDefinition
AbstractCellBasedTestSuite	BoundaryElement	DummyModifier	MutableElement	SpaceConvergenceTester
AbstractCellBasedWithTimingsTestSuite	BoundaryNodeWriter	DynamicCellModelLoader	MutableElement< 1, SPACE_DIM >	SphereGeometryBoundaryCondition
AbstractCellBasedWriter	Box	DynamicModelLoaderRegistry	MutableMesh	SteadyStateRestitutionStimulus
AbstractCellCycleModel	BuskeAdhesiveForce	E	MutableVertexMesh	SteadyStateRunner
AbstractCellCycleModelOdeSolver	BuskeCompressionForce		N	StemCellProliferativeType
AbstractCellKiller	BuskeElasticForce	AbstractLookupTableCollection::EventHandler		StepSizeException
AbstractCellMutationState	C	AbstractMeshReader::ElementIterator	AbstractMesh::NodeIterator	StiffnessMatrixAssembler
AbstractCellPopulation		AbstractTetrahedralMesh::ElementIterator	AbstractMeshReader::NodeIterator	StimulusBoundaryCondition
AbstractCellPopulationBoundaryCondition	CaBasedCellPopulation	ELASTICITY_SOLVER	NagaiHondaDifferentialAdhesionForce	StochasticOxygenBasedCellCycleModel
AbstractCellPopulationCountWriter	CARDIAC_CELL	Electrodes	NagaiHondaForce	StochasticWntCellCycleModel
AbstractCellPopulationWriter	CardiacElectroMechanicsProblem	ElectrodesStimulusFactory	Nash2004ContractionModel	StokesFlowAssembler
AbstractCellProliferativeType	CardiacElectroMechProbRegularGeom	ElectroMechanicsProblemDefinition	NashHunterPoleZeroLaw	StokesFlowPreconditionerAssembler
AbstractCellProperty	CardiacNewtonSolver	Element	NaturalNeumannSurfaceTermAssembler	StokesFlowProblemDefinition
AbstractCellWriter	CardiacSimulation	ElementAndWeights	NhsContractionModel	StokesFlowSolver
AbstractCentreBasedCellPopulation	CardiacSimulationArchiver	ElementAttributes	NhsModelWithBackwardSolver	StreeterFibreGenerator
AbstractCentreBasedDivisionRule	Cell	ElementData	NoCellCycleModel	StressPerElementWriter
AbstractChasteRegion	CellAgesWriter	EllipticBoxDomainPdeModifier	Node	StressRecoveror
AbstractCompressibleMaterialLaw	CellAncestor	EllipticGrowingDomainPdeModifier	NodeAttributes	SurfaceAreaConstraintPottsUpdateRule
AbstractConductivityModifier	CellAncestorWriter	EulerIvpOdeSolver	NodeBasedCellPopulation	T
AbstractConductivityTensors	CellAppliedForceWriter	Exception	NodeBasedCellPopulationWithBuskeUpdate
AbstractContinuumMechanicsAssembler	CellBasedEllipticPdeSolver	ExclusionCaBasedDivisionRule	NodeBasedCellPopulationWithParticles	T2SwapCellKiller
AbstractContinuumMechanicsSolver	CellBasedEventHandler	ExecutableSupport	NodeLocationWriter	TargetAreaLinearGrowthModifier
AbstractContractionCellFactory	CellBasedParabolicPdeSolver	ExplicitCardiacMechanicsSolver	NodeMap	TargetedCellKiller
AbstractContractionModel	CellBasedSimulationArchiver	ExponentialG1GenerationalCellCycleModel	NodePartitioner	TetrahedralMesh
AbstractConvergenceTester	CellBetaCateninWriter	ExponentialMaterialLaw	NodesOnlyMesh	TimeModifier
AbstractCorrectionTermAssembler	CellCycleModelOdeHandler	ExtendedBidomainAssembler	NodeVelocityWriter	Timer
AbstractCryptStatistics	CellCycleModelOdeSolver	ExtendedBidomainMassMatrixAssembler	NonCachedTetrahedralMesh	TimeStepper
AbstractCvodeCell	CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >	ExtendedBidomainNeumannSurfaceTermAssembler	NonlinearElasticityTools	Toroidal2dVertexMesh
AbstractCvodeCellWithDataClamp	CellCycleModelProteinConcentrationsWriter	ExtendedBidomainProblem	NonPhysiologicalContractionModel	ToroidalHoneycombVertexMeshGenerator
AbstractCvodeSystem	CellCycleTimesGenerator	ExtendedBidomainSolver	NullSrnModel	TransitCellProliferativeType
AbstractDataReader	CellData	ExtendedBidomainTissue	NumericFileComparison	TrianglesMeshReader
AbstractDataWriter	CellDataItemWriter	TetrahedralMesh::EdgeIterator	O	TrianglesMeshWriter
AbstractDynamicallyLoadableEntity	CellDeltaNotchWriter	F		TysonNovak2001OdeSystem
AbstractDynamicLinearPdeSolver	CellId		ObjectCommunicator	TysonNovakCellCycleModel
AbstractElement	CellIdWriter	FactorModifier	ObsoleteBoxCollection	U
AbstractExtendedBidomainSolver	CellLabel	FakeBathCell	OdeConvergenceTester
AbstractFeAssemblerCommon	CellLabelWriter	FakeBathContractionModel	OdeLinearSystemSolver	UniformCellCycleModel
AbstractFeAssemblerInterface	CellLocationIndexWriter	FarhadifarForce	OdePdeConvergenceTester	UniformG1GenerationalCellCycleModel
AbstractFeCableIntegralAssembler	CellMLLoader	FemlabMeshReader	OdeSolution	UniformSourceEllipticPde
AbstractFeSurfaceIntegralAssembler	CellMLToSharedLibraryConverter	FibreConverter	OdeSystemForCoupledHeatEquation	UniformSourceParabolicPde
AbstractFeVolumeIntegralAssembler	CellMutationStatesCountWriter	FibreReader	OdeSystemForCoupledHeatEquationWithSource	V
AbstractFileComparison	CellMutationStatesWriter	FibreWriter	OdeSystemInformation
AbstractForce	CellPopulationAdjacencyMatrixWriter	FileComparison	OffLatticeSimulation	CombinedOdeSystem::VariableParameterMap
AbstractFunctionalCalculator	CellPopulationAreaWriter	FileFinder	OnLatticeSimulation	VanLeeuwen2009WntSwatCellCycleModelHypothesisOne
AbstractGeneralizedRushLarsenCardiacCell	CellPopulationElementWriter	FineCoarseMeshPair	OperatorSplittingMonodomainSolver	VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
AbstractGrowingDomainPdeModifier	CellProliferativePhasesCountWriter	FitzHughNagumo1961OdeSystem	OrthotropicConductivityTensors	VanLeeuwen2009WntSwatCellCycleOdeSystem
AbstractHdf5Access	CellProliferativePhasesWriter	FixedCentreBasedDivisionRule	OutputDirectoryFifoQueue	VertexBasedCellPopulation
AbstractHdf5Converter	CellProliferativeTypesCountWriter	FixedG1GenerationalCellCycleModel	OutputFileHandler	VertexCryptBoundaryForce
AbstractIncompressibleMaterialLaw	CellProliferativeTypesWriter	FixedModifier	P	VertexElement
AbstractIsotropicCompressibleMaterialLaw	CellProperties	FixedSequenceCellCycleModel		VertexElement< 1, SPACE_DIM >
AbstractIsotropicIncompressibleMaterialLaw	CellPropertyCollection	FixedVertexBasedDivisionRule	PapillaryFibreCalculator	VertexElementData
AbstractIvpOdeSolver	CellPropertyRegistry	ForwardEulerNumericalMethod	ParabolicBoxDomainPdeModifier	VertexElementMap
AbstractLinearEllipticPde	CellRadiusWriter	FourthOrderTensor	ParabolicGrowingDomainPdeModifier	VertexMesh
AbstractLinearParabolicPde	CellRosetteRankWriter	FunctionalBoundaryCondition	ParallelCellsGenerator	VertexMesh::VertexElementIterator
AbstractLinearParabolicPdeSystemForCoupledOdeSystem	CellsGenerator	XmlTools::Finalizer	ParallelColumnDataWriter	VertexMeshReader
AbstractLinearPde	CellVecData	G	PCBlockDiagonal	VertexMeshWriter
AbstractLinearPdeSolver	CellVolumesWriter		PCBlockDiagonal::PCBlockDiagonalContext	VertexT1SwapLocationsWriter
AbstractLookupTableCollection	CellwiseDataGradient	GammaG1CellCycleModel	PCLDUFactorisation	VertexT2SwapLocationsWriter
AbstractMaterialLaw	CellwiseOdeSystemInformation	GaussianQuadratureRule	PCLDUFactorisation::PCLDUFactorisationContext	VertexT3SwapLocationsWriter
AbstractMesh	CellwiseSourceEllipticPde	GeneralisedLinearSpringForce	PCTwoLevelsBlockDiagonal	VoltageInterpolaterOntoMechanicsMesh
AbstractMeshReader	CellwiseSourceParabolicPde	GeneralPlaneStimulusCellFactory	PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext	VolumeConstraintPottsUpdateRule
AbstractMeshWriter	ChasteBuildInfo	GenericEventHandler	PdeConvergenceTester	VolumeDependentAveragedSourceEllipticPde
AbstractModifier	ChasteCuboid	GmshMeshReader	PdeSimulationTime	VolumeTrackingModifier
AbstractNonlinearAssemblerSolverHybrid	ChasteEllipsoid	GmshTypes	PetscMatTools	VoronoiDataWriter
AbstractNonlinearElasticitySolver	ChasteNodesList	Goldbeter1991OdeSystem	PetscSetup	VoronoiVertexMeshGenerator
AbstractNonlinearEllipticPde	ChastePoint	Goldbeter1991SrnModel	PetscSetupUtils	VtkMeshReader
AbstractNonlinearSolver	ChastePoint< 0 >	GRL1IvpOdeSolver	PetscTools	VtkMeshWriter
AbstractNumericalMethod	ChastePosixPathFixer	GRL2IvpOdeSolver	PetscVecTools	VtkNonlinearElasticitySolutionWriter
AbstractOdeBasedCellCycleModel	ChemotacticForce	H	PlaneBasedCellKiller	W
AbstractOdeBasedContractionModel	ChemotaxisPottsUpdateRule		PlaneBoundaryCondition
AbstractOdeBasedPhaseBasedCellCycleModel	Citations	Hdf5DataReader	PlaneStimulusCellFactory	Warnings
AbstractOdeSrnModel	CmguiDeformedSolutionsWriter	Hdf5DataWriter	PoleZeroMaterialLaw	WelikyOsterForce
AbstractOdeSystem	CmguiMeshWriter	Hdf5ToCmguiConverter	PolynomialMaterialLaw3d	WildTypeCellMutationState
AbstractOdeSystemForCoupledPdeSystem	CML_noble_varghese_kohl_noble_1998_basic_with_sac	Hdf5ToMeshalyzerConverter	PopulationTestingForce	WntCellCycleModel
AbstractOdeSystemInformation	ColumnDataReader	Hdf5ToTxtConverter	PostProcessingWriter	WntCellCycleOdeSystem
AbstractOdeSystemWithAnalyticJacobian	ColumnDataWriter	Hdf5ToVtkConverter	PottsBasedCellPopulation	WntConcentration
AbstractOffLatticeCellPopulation	CombinedOdeSystem	Hdf5ToXdmfConverter	PottsElement	X
AbstractOneStepIvpOdeSolver	CombinedOdeSystemInformation	HeartConfig	PottsElementData
AbstractOnLatticeCellPopulation	CommandLineArguments	HeartConfigRelatedCellFactory	PottsMesh	XdmfMeshWriter
AbstractOutputModifier	CommandLineArgumentsMocker	HeartEventHandler	PottsMesh::PottsElementIterator	XmlTools
AbstractParameterisedSystem	CompareDoubles	HeartFileFinder	PottsMeshGenerator	XmlTransforms
AbstractPdeModifier	CompressibleExponentialLaw	HeartGeometryInformation	PottsMeshReader	Z
AbstractPerElementWriter	CompressibleMooneyRivlinMaterialLaw	HeartRegionCode	PottsMeshWriter
AbstractPhaseBasedCellCycleModel	CompressibleNonlinearElasticitySolver	HeterotypicBoundaryLengthWriter	ProcessSpecificArchive	ZeroNetChargeElectrodes
AbstractPottsUpdateRule	ConstantActiveTension	HeunIvpOdeSolver	ProgressReporter	ZeroStimulus
AbstractPurkinjeCellFactory	ConstBoundaryCondition	HoneycombMeshGenerator	PropagationPropertiesCalculator	ZeroStimulusCellFactory
AbstractRushLarsenCardiacCell	ContactInhibitionCellCycleModel	HoneycombVertexMeshGenerator	PseudoEcgCalculator	b
AbstractSimpleCellCycleModel	ContinuumMechanicsNeumannBcsAssembler	I	PurkinjeVentricularJunctionStimulus
AbstractSimpleGenerationalCellCycleModel	ContinuumMechanicsProblemDefinition		Q	badsubseg
AbstractSimplePhaseBasedCellCycleModel	ContractionModelInputParameters_	AbstractCellPopulation::Iterator		badtriang
AbstractSrnModel	CorriasBuistICCModified	CombinedOdeSystemInformation::InstancePointers	QuadraticBasisFunction	behavior
AbstractStaticLinearPdeSolver	CorriasBuistSMCModified	DistributedVector::Iterator	QuadraticBasisFunction< 0 >	e
AbstractSteadyStateRunner	CreateElectricsProblem	Identifiable	QuadraticMesh
AbstractStimulusFactory	CreateElectricsProblem< DIM, 1u >	ImplicitCardiacMechanicsSolver	QuadraticMeshHelper	exponential_table (boost::random::detail)
AbstractStimulusFunction	CreateElectricsProblem< DIM, 2u >	IncompressibleNonlinearElasticitySolver	QuadraturePointsGroup	exponential_distribution_v165 (boost::random)
AbstractTargetAreaModifier	CryptCellsGenerator	IsolatedLabelledCellKiller	R	event
AbstractTetrahedralElement	CryptCentreBasedDivisionRule	K		f
AbstractTetrahedralElement< 0, SPACE_DIM >	CryptProjectionForce		RadialCellDataDistributionWriter
AbstractTetrahedralMesh	CryptProjectionStatistics	Kerchoffs2003ContractionModel	RadialSloughingCellKiller	flipstacker
AbstractTetrahedralMeshWriter	CryptShovingCaBasedDivisionRule	L	RampedQuarterStimulusCellFactory	g
AbstractTimeAdaptivityController	CryptSimulation1d		RandomCaSwitchingUpdateRule
AbstractTwoBodyInteractionForce	CryptSimulation2d	LabelBasedContractionCellFactory	RandomCellKiller	gamma_distribution_v165 (boost::random)
AbstractUntemplatedCardiacProblem	CryptSimulationBoundaryCondition	LessThanNode	RandomDirectionCentreBasedDivisionRule	m
AbstractUntemplatedConvergenceTester	CryptStatistics	LinearBasisFunction	RandomDirectionVertexBasedDivisionRule
AbstractUntemplatedParameterisedSystem	CryptVertexBasedDivisionRule	LinearBasisFunction< 0 >	RandomNumberGenerator	memorypool
AbstractUpdateRule	CuboidMeshConstructor	LinearParabolicPdeSystemWithCoupledOdeSystemSolver	RegularStimulus	mesh
AbstractVanLeeuwen2009WntSwatCellCycleModel	CvodeAdaptor	LinearSpringWithVariableSpringConstantsForce	RegularStimulusZeroNetCharge	n
AbstractVertexBasedDivisionRule	CvodeData_	LinearSystem	RelativeTo
AbstractWntOdeBasedCellCycleModel	Cylindrical2dMesh	LogFile	ReplicatableVector	normal_table_v165 (boost::random::detail)
ActivationOutputModifier	Cylindrical2dNodesOnlyMesh	LuoRudySpiralWaveCellFactory	RepulsionForce	normal_distribution_v165 (boost::random)
AdhesionPottsUpdateRule	Cylindrical2dVertexMesh	M	RKC21IvpOdeSolver	null_deleter
Alarcon2004OxygenBasedCellCycleModel	CylindricalHoneycombMeshGenerator		RungeKutta2IvpOdeSolver	o
Alarcon2004OxygenBasedCellCycleOdeSystem	CylindricalHoneycombVertexMeshGenerator	MassMatrixAssembler	RungeKutta4IvpOdeSolver
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