AbstractBoundaryCondition< SPACE_DIM > | |
ConstBoundaryCondition< SPACE_DIM > | |
FunctionalBoundaryCondition< SPACE_DIM > | |
StimulusBoundaryCondition< SPACE_DIM > | |
AbstractBoundaryCondition< DIM > | |
AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > | |
AbstractPurkinjeCellFactory< ELEMENT_DIM, SPACE_DIM > | |
PlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM > | |
GeneralPlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM > | |
AbstractCardiacCellFactory< 2 > | |
LuoRudySpiralWaveCellFactory | |
AbstractCardiacCellFactory< DIM > | |
BathCellFactory< DIM, CELLTYPE > | |
RampedQuarterStimulusCellFactory< CELL, DIM > | |
ZeroStimulusCellFactory< CELL, DIM > | |
AbstractCardiacCellFactory< DIM, DIM > | |
AbstractCardiacCellFactory< SPACE_DIM > | |
HeartConfigRelatedCellFactory< SPACE_DIM > | |
AbstractCardiacCellInterface | |
AbstractCardiacCell | |
AbstractBackwardEulerCardiacCell< SIZE > | |
AbstractBackwardEulerCardiacCell< 0u > | |
AbstractGeneralizedRushLarsenCardiacCell | |
AbstractRushLarsenCardiacCell | |
CML_noble_varghese_kohl_noble_1998_basic_with_sac | |
CorriasBuistICCModified | |
CorriasBuistSMCModified | |
FakeBathCell | |
FitzHughNagumo1961OdeSystem | |
AbstractCvodeCell | |
AbstractCvodeCellWithDataClamp | |
AbstractCardiacMechanicsSolverInterface< DIM > | |
AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > | |
ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > | |
ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > | |
AbstractCellCycleModelOdeSolver | |
CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER > | |
CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver > | |
AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Iterator | |
AbstractChasteRegion< SPACE_DIM > | |
ChasteCuboid< SPACE_DIM > | |
ChasteEllipsoid< SPACE_DIM > | |
ChasteNodesList< SPACE_DIM > | |
AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM > | |
AbstractConductivityModifier< DIM, DIM > | |
CardiacElectroMechanicsProblem< DIM, ELEC_PROB_DIM > | |
CardiacElectroMechanicsProblem< DIM > | |
CardiacElectroMechProbRegularGeom< DIM > | |
AbstractConductivityModifier< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM > | Forward declaration which is going to be used for friendship |
AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM > | |
OrthotropicConductivityTensors< ELEMENT_DIM, SPACE_DIM > | |
AbstractConductivityTensors< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractConductivityTensors< SPACE_DIM, SPACE_DIM > | |
AbstractContinuumMechanicsSolver< DIM > | |
AbstractNonlinearElasticitySolver< DIM > | |
CompressibleNonlinearElasticitySolver< DIM > | |
IncompressibleNonlinearElasticitySolver< DIM > | |
StokesFlowSolver< DIM > | |
AbstractContractionCellFactory< DIM > | |
LabelBasedContractionCellFactory< DIM > | |
AbstractContractionModel | |
AbstractAlgebraicContractionModel | |
ConstantActiveTension | |
FakeBathContractionModel | |
NonPhysiologicalContractionModel | |
AbstractOdeBasedContractionModel | |
Kerchoffs2003ContractionModel | |
Nash2004ContractionModel | |
NhsContractionModel | |
NhsModelWithBackwardSolver | |
AbstractCryptStatistics | |
CryptProjectionStatistics | |
CryptStatistics | |
AbstractDataReader | |
ColumnDataReader | |
AbstractDataWriter | |
ColumnDataWriter | |
ParallelColumnDataWriter | |
AbstractDynamicallyLoadableEntity | |
AbstractElement< ELEMENT_DIM, SPACE_DIM > | |
AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM > | |
BoundaryElement< ELEMENT_DIM, SPACE_DIM > | |
Element< ELEMENT_DIM, SPACE_DIM > | |
MutableElement< ELEMENT_DIM, SPACE_DIM > | |
VertexElement< ELEMENT_DIM, SPACE_DIM > | |
MutableElement< DIM, DIM > | |
PottsElement< DIM > | |
AbstractElement< 0, SPACE_DIM > | |
AbstractTetrahedralElement< 0, SPACE_DIM > | |
AbstractElement< 1, SPACE_DIM > | |
MutableElement< 1, SPACE_DIM > | |
VertexElement< 1, SPACE_DIM > | |
AbstractFileComparison | |
FileComparison | |
NumericFileComparison | |
AbstractFunctionalCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractHdf5Access | |
Hdf5DataReader | |
Hdf5DataWriter | |
AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM > | |
Hdf5ToCmguiConverter< ELEMENT_DIM, SPACE_DIM > | |
Hdf5ToMeshalyzerConverter< ELEMENT_DIM, SPACE_DIM > | |
Hdf5ToTxtConverter< ELEMENT_DIM, SPACE_DIM > | |
Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM > | |
Hdf5ToXdmfConverter< ELEMENT_DIM, SPACE_DIM > | |
AbstractLinearEllipticPde< ELEMENT_DIM, SPACE_DIM > | |
AbstractLinearEllipticPde< DIM, DIM > | |
AveragedSourcePde< DIM > | |
VolumeDependentAveragedSourcePde< DIM > | |
CellwiseSourcePde< DIM > | |
SimpleUniformSourcePde< DIM > | |
AbstractLinearParabolicPde< ELEMENT_DIM, SPACE_DIM > | |
AbstractLinearParabolicPdeSystemForCoupledOdeSystem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractLookupTableCollection | |
AbstractMaterialLaw< DIM > | |
AbstractCompressibleMaterialLaw< DIM > | |
AbstractIsotropicCompressibleMaterialLaw< DIM > | |
CompressibleMooneyRivlinMaterialLaw< DIM > | |
CompressibleExponentialLaw< DIM > | |
AbstractIncompressibleMaterialLaw< DIM > | |
AbstractIsotropicIncompressibleMaterialLaw< DIM > | |
ExponentialMaterialLaw< DIM > | |
MooneyRivlinMaterialLaw< DIM > | |
AbstractIsotropicIncompressibleMaterialLaw< 3 > | |
PolynomialMaterialLaw3d | |
PoleZeroMaterialLaw< DIM > | |
NashHunterPoleZeroLaw< DIM > | |
AbstractIncompressibleMaterialLaw< 2 > | |
SchmidCostaExponentialLaw2d | |
AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator | |
AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > | |
AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM > | |
FemlabMeshReader< ELEMENT_DIM, SPACE_DIM > | |
MemfemMeshReader< ELEMENT_DIM, SPACE_DIM > | |
GmshMeshReader< ELEMENT_DIM, SPACE_DIM > | |
TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM > | |
VertexMeshReader< ELEMENT_DIM, SPACE_DIM > | |
VtkMeshReader< ELEMENT_DIM, SPACE_DIM > | |
AbstractMeshReader< SPACE_DIM, SPACE_DIM > | |
PottsMeshReader< SPACE_DIM > | |
AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
CmguiMeshWriter< DIM, DIM > | |
CmguiDeformedSolutionsWriter< DIM > | |
MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
VtkMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
XdmfMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
Hdf5ToXdmfConverter< ELEMENT_DIM, SPACE_DIM > | |
VertexMeshWriter< ELEMENT_DIM, SPACE_DIM > | |
AbstractMeshWriter< SPACE_DIM, SPACE_DIM > | |
PottsMeshWriter< DIM > | |
AbstractModifier | |
DummyModifier | |
FactorModifier | |
FixedModifier | |
TimeModifier | |
AbstractNonlinearEllipticPde< SPACE_DIM > | |
AbstractNonlinearSolver | |
SimpleNewtonNonlinearSolver | |
SimplePetscNonlinearSolver | |
AbstractOdeSystemInformation | |
CellwiseOdeSystemInformation< ODE_SYSTEM > | |
CombinedOdeSystemInformation | |
OdeSystemInformation< ODE_SYSTEM > | |
AbstractOutputModifier | |
ActivationOutputModifier | |
SingleTraceOutputModifier | |
AbstractPerElementWriter< ELEMENT_DIM, SPACE_DIM, DATA_SIZE > | |
AbstractPerElementWriter< DIM, DIM, DIM *DIM > | |
StressPerElementWriter< DIM > | |
AbstractPerElementWriter< SPACE_DIM, SPACE_DIM, SPACE_DIM *SPACE_DIM > | |
StreeterFibreGenerator< SPACE_DIM > | |
AbstractSteadyStateRunner | |
SteadyStateRunner | |
AbstractStimulusFactory< ELEMENT_DIM, SPACE_DIM > | |
AbstractStimulusFactory< DIM > | |
ElectrodesStimulusFactory< DIM > | |
ZeroNetChargeElectrodes< DIM > | |
AbstractStimulusFunction | |
MultiStimulus | |
S1S2Stimulus | |
SteadyStateRestitutionStimulus | |
PurkinjeVentricularJunctionStimulus | |
RegularStimulus | |
RegularStimulusZeroNetCharge | |
SimpleStimulus | |
ZeroStimulus | |
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator | |
AbstractTimeAdaptivityController | |
AbstractUntemplatedConvergenceTester | |
AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM > | |
OdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM > | |
OdePdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM > | |
PdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM > | |
SpaceConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM > | |
AbstractUntemplatedParameterisedSystem | |
AbstractParameterisedSystem< VECTOR > | |
AbstractParameterisedSystem< N_Vector > | |
AbstractCvodeSystem | |
AbstractCvodeCell | |
AbstractParameterisedSystem< std::vector< double > > | |
AbstractOdeSystem | |
AbstractCardiacCell | |
AbstractOdeBasedContractionModel | |
AbstractOdeSystemForCoupledPdeSystem | |
OdeSystemForCoupledHeatEquation | |
OdeSystemForCoupledHeatEquationWithSource | |
AbstractOdeSystemWithAnalyticJacobian | |
TysonNovak2001OdeSystem | |
Alarcon2004OxygenBasedCellCycleOdeSystem | |
CombinedOdeSystem | |
DeltaNotchOdeSystem | |
Goldbeter1991OdeSystem | |
Mirams2010WntOdeSystem | |
VanLeeuwen2009WntSwatCellCycleOdeSystem | |
WntCellCycleOdeSystem | |
ArchiveLocationInfo | |
ArchiveOpener< Archive, Stream > | |
badsubseg | |
badtriang | |
behavior | |
enable_shared_from_this | |
Cell | |
DynamicCellModelLoader | |
iterator_facade | |
AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::ElementIterator | |
AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::NodeIterator | |
noncopyable | |
AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 1 > | |
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 2 > | |
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 3 > | |
AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > | |
MonodomainTissue< ELEMENT_DIM, SPACE_DIM > | |
AbstractCardiacTissue< SPACE_DIM > | |
BidomainTissue< SPACE_DIM > | |
BidomainTissue< DIM > | |
ExtendedBidomainTissue< SPACE_DIM > | |
ExtendedBidomainTissue< DIM > | |
AbstractCellCycleModel | |
AbstractOdeBasedCellCycleModel | |
AbstractWntOdeBasedCellCycleModel | |
AbstractVanLeeuwen2009WntSwatCellCycleModel | |
VanLeeuwen2009WntSwatCellCycleModelHypothesisOne | |
VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo | |
WntCellCycleModel | |
StochasticWntCellCycleModel | |
Alarcon2004OxygenBasedCellCycleModel | |
TysonNovakCellCycleModel | |
AbstractSimpleCellCycleModel | |
AbstractSimpleGenerationBasedCellCycleModel | |
ExponentiallyDistributedStochasticDurationGenerationBasedCellCycleModel | |
FixedDurationGenerationBasedCellCycleModel | |
StochasticDurationGenerationBasedCellCycleModel | |
ContactInhibitionCellCycleModel | |
GammaDistributedStochasticDurationCellCycleModel | |
SimpleOxygenBasedCellCycleModel | |
StochasticOxygenBasedCellCycleModel | |
SimpleWntCellCycleModel | |
SingleOdeWntCellCycleModel | |
StochasticDurationCellCycleModel | |
AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | |
AbstractContinuumMechanicsAssembler< DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX > | |
AbstractContinuumMechanicsAssembler< DIM, true, true > | |
StokesFlowAssembler< DIM > | |
StokesFlowPreconditionerAssembler< DIM > | |
AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | |
AbstractFeCableIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | |
AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | |
AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | |
AbstractCardiacFeVolumeIntegralAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM, true, false, CARDIAC > | |
AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, 1 > | |
MonodomainCorrectionTermAssembler< ELEM_DIM, SPACE_DIM > | |
MonodomainCorrectionTermAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, 2 > | |
BidomainCorrectionTermAssembler< ELEM_DIM, SPACE_DIM > | |
BidomainCorrectionTermAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 1, false, true, CARDIAC > | |
MonodomainAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 1, false, true, NORMAL > | |
MonodomainStiffnessMatrixAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 2, false, true, CARDIAC > | |
BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | |
BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 3, true, true, NORMAL > | |
ExtendedBidomainAssembler< ELEMENT_DIM, SPACE_DIM > | |
ExtendedBidomainAssembler< ELEM_DIM, SPACE_DIM > | |
AbstractFeVolumeIntegralAssembler< DIM, DIM, 2, false, true, CARDIAC > | |
BidomainMassMatrixAssembler< DIM > | |
AbstractFeVolumeIntegralAssembler< DIM, DIM, 3, false, true, NORMAL > | |
ExtendedBidomainMassMatrixAssembler< DIM > | |
AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 1, false, true, NORMAL > | |
MassMatrixAssembler< ELEMENT_DIM, SPACE_DIM > | |
StiffnessMatrixAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, INTERPOLATION_LEVEL > | |
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, INTERPOLATION_LEVEL > | |
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1, NORMAL > | |
SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM > | |
SimpleLinearEllipticSolver< DIM, DIM > | |
CellBasedPdeSolver< DIM > | |
SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | |
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NORMAL > | |
LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, true, NONLINEAR > | |
AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, 1 > | |
SimpleNonlinearEllipticSolver< ELEMENT_DIM, SPACE_DIM > | |
AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, false, NORMAL > | |
AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, 1 > | |
AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 2 > | |
BidomainNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM > | |
AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, 3 > | |
ExtendedBidomainNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM > | |
ExtendedBidomainNeumannSurfaceTermAssembler< ELEM_DIM, SPACE_DIM > | |
AbstractFeAssemblerInterface< true, false > | |
ContinuumMechanicsNeumannBcsAssembler< DIM > | |
AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
MonodomainSolver< ELEMENT_DIM, SPACE_DIM > | |
OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM > | |
SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM > | |
AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 > | |
AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM > | |
BidomainSolver< ELEMENT_DIM, SPACE_DIM > | |
AbstractBidomainSolver< DIM, DIM > | |
AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 > | |
AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM > | |
AbstractExtendedBidomainSolver< DIM, DIM > | |
AbstractExtendedBidomainSolver< ELEM_DIM, SPACE_DIM > | |
ExtendedBidomainSolver< ELEM_DIM, SPACE_DIM > | |
AbstractStaticLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractStaticLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 1 > | |
SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM > | |
SimpleLinearEllipticSolver< DIM, DIM > | |
AbstractMesh< ELEMENT_DIM, SPACE_DIM > | |
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | |
DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | |
MixedDimensionMesh< ELEMENT_DIM, SPACE_DIM > | |
DistributedTetrahedralMesh< DIM, DIM > | |
DistributedQuadraticMesh< DIM > | |
TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | |
MutableMesh< ELEMENT_DIM, SPACE_DIM > | |
MutableMesh< 2, 2 > | |
Cylindrical2dMesh | |
MutableMesh< DIM, DIM > | |
MutableMesh< ELEMENT_DIM, ELEMENT_DIM > | |
MutableMesh< SPACE_DIM, SPACE_DIM > | |
NodesOnlyMesh< SPACE_DIM > | |
NodesOnlyMesh< 2 > | |
Cylindrical2dNodesOnlyMesh | |
NodesOnlyMesh< DIM > | |
NonCachedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | |
TetrahedralMesh< 3, 3 > | |
TetrahedralMesh< DIM, DIM > | |
QuadraticMesh< DIM > | |
AbstractTetrahedralMesh< DIM, DIM > | |
AbstractTetrahedralMesh< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractTetrahedralMesh< SPACE_DIM, SPACE_DIM > | |
VertexMesh< ELEMENT_DIM, SPACE_DIM > | |
MutableVertexMesh< ELEMENT_DIM, SPACE_DIM > | |
MutableVertexMesh< 2, 2 > | |
Cylindrical2dVertexMesh | |
Toroidal2dVertexMesh | |
MutableVertexMesh< DIM, DIM > | |
VertexMesh< DIM, DIM > | |
VertexMesh< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractMesh< DIM, DIM > | |
PottsMesh< DIM > | |
PottsMesh< SPACE_DIM > | |
AbstractMesh< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractMesh< SPACE_DIM, SPACE_DIM > | |
AbstractSrnModel | |
AbstractOdeSrnModel | |
DeltaNotchSrnModel | |
Goldbeter1991SrnModel | |
NullSrnModel | |
AbstractUntemplatedCardiacProblem | |
AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
AbstractCardiacProblem< DIM, DIM, 1 > | |
AbstractCardiacProblem< DIM, DIM, 2 > | |
BidomainProblem< DIM > | |
BidomainWithBathProblem< DIM > | |
AbstractCardiacProblem< DIM, DIM, 3 > | |
ExtendedBidomainProblem< DIM > | |
AbstractCardiacProblem< DIM, DIM, ELEC_PROB_DIM > | |
AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, 1 > | |
MonodomainProblem< ELEMENT_DIM, SPACE_DIM > | |
Cell | |
CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER > | |
CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver > | |
CommandLineArguments | |
DynamicModelLoaderRegistry | |
SerializableSingleton< SINGLETON_CLASS > | |
SerializableSingleton< RandomNumberGenerator > | |
RandomNumberGenerator | |
SerializableSingleton< SimulationTime > | |
SimulationTime | |
SerializableSingleton< WntConcentration< DIM > > | |
WntConcentration< DIM > | |
boost::random::detail::normal_table< RealType > | |
boost::random::detail::unit_normal_distribution< RealType > | |
boost::random::normal_distribution_v156< RealType > | |
boost::random::normal_distribution_v156< RealType >::param_type | |
boost::serialization::version< AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > > | |
boost::serialization::version< AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > > | |
boost::serialization::version< AbstractChasteRegion< SPACE_DIM > > | |
boost::serialization::version< AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > > | |
Box< DIM > | |
BoxCollection< DIM > | |
CARDIAC_CELL | |
AbstractCardiacCellWithModifiers< CARDIAC_CELL > | |
CardiacNewtonSolver< SIZE, CELLTYPE > | |
CardiacSimulation | |
CardiacSimulationArchiver< PROBLEM_CLASS > | |
CellBasedSimulationArchiver< ELEMENT_DIM, SIM, SPACE_DIM > | |
CellCycleModelOdeHandler | |
AbstractOdeBasedCellCycleModel | |
AbstractOdeSrnModel | |
SingleOdeWntCellCycleModel | |
CellMLLoader | |
CellMLToSharedLibraryConverter | |
CellProperties | |
CellPropertyCollection | |
CellPropertyRegistry | |
CellsGenerator< CELL_CYCLE_MODEL, DIM > | |
CellsGenerator< CELL_CYCLE_MODEL, 2 > | |
CryptCellsGenerator< CELL_CYCLE_MODEL > | |
CellwiseDataGradient< DIM > | |
ChasteBuildInfo | |
ChastePoint< DIM > | |
ChastePoint< 0 > | |
ChastePoint< SPACE_DIM > | |
ChastePosixPathFixer | |
Citations | |
CombinedOdeSystem::VariableParameterMap | |
CombinedOdeSystemInformation::InstancePointers | |
CommandLineArgumentsMocker | |
CompareDoubles | |
ContinuumMechanicsProblemDefinition< DIM > | |
SolidMechanicsProblemDefinition< DIM > | |
ElectroMechanicsProblemDefinition< DIM > | |
StokesFlowProblemDefinition< DIM > | |
ContractionModelInputParameters_ | |
CreateElectricsProblem< DIM, PROBLEM_DIM > | |
CreateElectricsProblem< DIM, 1u > | |
CreateElectricsProblem< DIM, 2u > | |
CuboidMeshConstructor< ELEMENT_DIM, SPACE_DIM > | |
CvodeData_ | |
GlobalFixture | |
PetscSetup | |
PetscSetup | |
TestSuite | |
AbstractCellBasedTestSuite | |
AbstractCellBasedWithTimingsTestSuite | |
DataAtQuadraturePoint_ | |
DataWriterVariable | |
DiscreteSystemForceCalculator | |
DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM > | |
DistributedBoxCollection< DIM > | |
DistributedBoxCollection< SPACE_DIM > | |
DistributedTetrahedralMeshPartitionType | |
DistributedVector | |
DistributedVector::Chunk | |
DistributedVector::Iterator | |
DistributedVector::Stripe | |
DistributedVectorException | |
DistributedVectorFactory | |
ELASTICITY_SOLVER | |
AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM > | |
Electrodes< DIM > | |
ElementAndWeights< DIM > | |
ElementAttributes< ELEMENT_DIM, SPACE_DIM > | |
ElementData | |
event | |
Exception | |
ExecutableSupport | |
FibreConverter | |
FibreReader< DIM > | |
FibreWriter< DIM > | |
FileFinder | |
HeartFileFinder | |
FineCoarseMeshPair< DIM > | |
flipstacker | |
FourthOrderTensor< DIM1, DIM2, DIM3, DIM4 > | |
FourthOrderTensor< DIM, DIM, DIM, DIM > | |
GaussianQuadratureRule< ELEMENT_DIM > | |
GaussianQuadratureRule< 1 > | |
GaussianQuadratureRule< DIM > | |
GaussianQuadratureRule< DIM-1 > | |
GaussianQuadratureRule< ELEMENT_DIM-1 > | |
GenericEventHandler< NUM_EVENTS, CONCRETE > | |
GenericEventHandler< 1, EventHandler > | |
AbstractLookupTableCollection::EventHandler | |
GenericEventHandler< 11, CellBasedEventHandler > | |
CellBasedEventHandler | |
GenericEventHandler< 11, MeshEventHandler > | |
MeshEventHandler | |
GenericEventHandler< 16, HeartEventHandler > | |
HeartEventHandler | |
GenericEventHandler< 7, MechanicsEventHandler > | |
MechanicsEventHandler | |
GmshTypes | |
HeartConfig | |
HeartGeometryInformation< SPACE_DIM > | |
HeartGeometryInformation< ELEMENT_DIM > | |
HeartRegionCode | |
HoneycombMeshGenerator | |
CylindricalHoneycombMeshGenerator | |
HoneycombVertexMeshGenerator | |
CylindricalHoneycombVertexMeshGenerator | |
ToroidalHoneycombVertexMeshGenerator | |
Identifiable | |
AbstractCaBasedDivisionRule< DIM > | |
AbstractCaBasedDivisionRule< SPACE_DIM > | |
ExclusionCaBasedDivisionRule< SPACE_DIM > | |
AbstractCaSwitchingUpdateRule< DIM > | |
RandomCaSwitchingUpdateRule< DIM > | |
AbstractCaUpdateRule< DIM > | |
DiffusionCaUpdateRule< DIM > | |
AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | |
OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellBasedSimulation< DIM > | |
OnLatticeSimulation< DIM > | |
AbstractCellBasedSimulation< ELEMENT_DIM, ELEMENT_DIM > | |
OffLatticeSimulation< 1 > | |
CryptSimulation1d | |
OffLatticeSimulation< 2 > | |
CryptSimulation2d | |
AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellBasedSimulationModifier< DIM, DIM > | |
AbstractTargetAreaModifier< DIM > | |
FarhadifarTypeModifier< DIM > | |
SimpleTargetAreaModifier< DIM > | |
DeltaNotchTrackingModifier< DIM > | |
VolumeTrackingModifier< DIM > | |
AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellPopulationCountWriter< ELEMENT_DIM, SPACE_DIM > | |
CellMutationStatesCountWriter< ELEMENT_DIM, SPACE_DIM > | |
CellProliferativePhasesCountWriter< ELEMENT_DIM, SPACE_DIM > | |
CellProliferativeTypesCountWriter< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM > | |
BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM > | |
CellPopulationAdjacencyMatrixWriter< ELEMENT_DIM, SPACE_DIM > | |
CellPopulationAreaWriter< ELEMENT_DIM, SPACE_DIM > | |
CellPopulationElementWriter< ELEMENT_DIM, SPACE_DIM > | |
HeterotypicBoundaryLengthWriter< ELEMENT_DIM, SPACE_DIM > | |
NodeLocationWriter< ELEMENT_DIM, SPACE_DIM > | |
NodeVelocityWriter< ELEMENT_DIM, SPACE_DIM > | |
VertexT1SwapLocationsWriter< ELEMENT_DIM, SPACE_DIM > | |
VertexT2SwapLocationsWriter< ELEMENT_DIM, SPACE_DIM > | |
VertexT3SwapLocationsWriter< ELEMENT_DIM, SPACE_DIM > | |
VoronoiDataWriter< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellWriter< ELEMENT_DIM, SPACE_DIM > | |
CellAgesWriter< ELEMENT_DIM, SPACE_DIM > | |
CellAncestorWriter< ELEMENT_DIM, SPACE_DIM > | |
CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM > | |
CellCycleModelProteinConcentrationsWriter< ELEMENT_DIM, SPACE_DIM > | |
CellDeltaNotchWriter< ELEMENT_DIM, SPACE_DIM > | |
CellIdWriter< ELEMENT_DIM, SPACE_DIM > | |
CellLabelWriter< ELEMENT_DIM, SPACE_DIM > | |
CellLocationIndexWriter< ELEMENT_DIM, SPACE_DIM > | |
CellMutationStatesWriter< ELEMENT_DIM, SPACE_DIM > | |
CellProliferativePhasesWriter< ELEMENT_DIM, SPACE_DIM > | |
CellProliferativeTypesWriter< ELEMENT_DIM, SPACE_DIM > | |
CellRadiusWriter< ELEMENT_DIM, SPACE_DIM > | |
CellRosetteRankWriter< ELEMENT_DIM, SPACE_DIM > | |
CellVolumesWriter< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellCycleModel | |
AbstractCellKiller< SPACE_DIM > | |
ApoptoticCellKiller< SPACE_DIM > | |
AbstractCellKiller< 2 > | |
RadialSloughingCellKiller | |
AbstractCellKiller< DIM > | |
IsolatedLabelledCellKiller< DIM > | |
PlaneBasedCellKiller< DIM > | |
RandomCellKiller< DIM > | |
SloughingCellKiller< DIM > | |
T2SwapCellKiller< DIM > | |
TargetedCellKiller< DIM > | |
AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > | |
AbstractOffLatticeCellPopulation< ELEMENT_DIM, SPACE_DIM > | |
AbstractCentreBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > | |
MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > | |
MeshBasedCellPopulation< 1 > | |
MeshBasedCellPopulation< 2 > | |
MeshBasedCellPopulation< DIM > | |
MeshBasedCellPopulationWithGhostNodes< DIM > | |
AbstractOffLatticeCellPopulation< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractCentreBasedCellPopulation< DIM > | |
NodeBasedCellPopulation< DIM > | |
NodeBasedCellPopulationWithBuskeUpdate< DIM > | |
NodeBasedCellPopulationWithParticles< DIM > | |
AbstractCellPopulation< DIM > | |
AbstractOnLatticeCellPopulation< DIM > | |
CaBasedCellPopulation< DIM > | |
PottsBasedCellPopulation< DIM > | |
AbstractCellPopulation< DIM, DIM > | |
AbstractCellPopulation< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractOffLatticeCellPopulation< DIM > | |
VertexBasedCellPopulation< SPACE_DIM > | |
AbstractCellPopulation< SPACE_DIM > | |
AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM > | |
PlaneBoundaryCondition< ELEMENT_DIM, SPACE_DIM > | |
AbstractCellPopulationBoundaryCondition< DIM > | |
CryptSimulationBoundaryCondition< DIM > | |
SphereGeometryBoundaryCondition< DIM > | |
AbstractCellProperty | |
AbstractCellMutationState | |
ApcOneHitCellMutationState | |
ApcTwoHitCellMutationState | |
BetaCateninOneHitCellMutationState | |
WildTypeCellMutationState | |
AbstractCellProliferativeType | |
DefaultCellProliferativeType | |
DifferentiatedCellProliferativeType | |
StemCellProliferativeType | |
TransitCellProliferativeType | |
ApoptoticCellProperty | |
CellAncestor | |
CellData | |
CellId | |
CellLabel | |
CellVecData | |
AbstractForce< ELEMENT_DIM, SPACE_DIM > | |
AbstractTwoBodyInteractionForce< ELEMENT_DIM, SPACE_DIM > | |
GeneralisedLinearSpringForce< ELEMENT_DIM, SPACE_DIM > | |
DifferentialAdhesionGeneralisedLinearSpringForce< ELEMENT_DIM, SPACE_DIM > | |
AbstractTwoBodyInteractionForce< ELEMENT_DIM, ELEMENT_DIM > | |
GeneralisedLinearSpringForce< 2 > | |
CryptProjectionForce | |
GeneralisedLinearSpringForce< DIM > | |
LinearSpringWithVariableSpringConstantsForce< DIM > | |
RepulsionForce< DIM > | |
AbstractForce< DIM > | |
BuskeCompressionForce< DIM > | |
ChemotacticForce< DIM > | |
DiffusionForce< DIM > | |
FarhadifarForce< DIM > | |
NagaiHondaForce< DIM > | |
NagaiHondaDifferentialAdhesionForce< DIM > | |
VertexCryptBoundaryForce< DIM > | |
WelikyOsterForce< DIM > | |
AbstractForce< ELEMENT_DIM, ELEMENT_DIM > | |
AbstractTwoBodyInteractionForce< DIM > | |
BuskeAdhesiveForce< DIM > | |
BuskeElasticForce< DIM > | |
AbstractIvpOdeSolver | |
AbstractOneStepIvpOdeSolver | |
BackwardEulerIvpOdeSolver | |
EulerIvpOdeSolver | |
MockEulerIvpOdeSolver | |
GRL1IvpOdeSolver | |
GRL2IvpOdeSolver | |
HeunIvpOdeSolver | |
RungeKutta2IvpOdeSolver | |
RungeKutta4IvpOdeSolver | |
CvodeAdaptor | |
RungeKuttaFehlbergIvpOdeSolver | |
AbstractPottsUpdateRule< DIM > | |
AdhesionPottsUpdateRule< DIM > | |
DifferentialAdhesionPottsUpdateRule< DIM > | |
ChemotaxisPottsUpdateRule< DIM > | |
SurfaceAreaConstraintPottsUpdateRule< DIM > | |
VolumeConstraintPottsUpdateRule< DIM > | |
AbstractSrnModel | |
AbstractVertexBasedDivisionRule< SPACE_DIM > | |
DiagonalVertexBasedDivisionRule< SPACE_DIM > | |
RandomDirectionVertexBasedDivisionRule< SPACE_DIM > | |
ShortAxisVertexBasedDivisionRule< SPACE_DIM > | |
CellBasedPdeHandler< DIM > | |
CellBasedPdeHandlerOnCuboid< DIM > | |
CellBasedPdeHandler< ELEMENT_DIM > | |
CellBasedPdeHandler< SPACE_DIM > | |
LessThanNode< SPACE_DIM > | |
LinearBasisFunction< ELEMENT_DIM > | |
LinearBasisFunction< 0 > | |
LinearSystem | |
LogFile | |
memorypool | |
mesh | |
MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >::SpringIterator | |
MeshPottsWriterIterators< SPACE_DIM > | |
MeshWriterIterators< ELEMENT_DIM, SPACE_DIM > | |
Node< SPACE_DIM > | |
Node< SPACE_DIM >::ContainingBoundaryElementIterator | |
Node< SPACE_DIM >::ContainingElementIterator | |
NodeAttributes< SPACE_DIM > | |
NodeMap | |
NodePartitioner< ELEMENT_DIM, SPACE_DIM > | |
NonlinearElasticityTools< DIM > | |
null_deleter | |
ObjectCommunicator< CLASS > | |
ObjectCommunicator< std::vector< std::pair< CellPtr, Node< DIM > * > > > | |
OdeLinearSystemSolver | |
OdeSolution | |
osub | |
otri | |
OutputDirectoryFifoQueue | |
OutputFileHandler | |
pack< class > | |
pack< void(T)> | |
PapillaryFibreCalculator | |
ParallelCellsGenerator< CELL_CYCLE_MODEL, DIM > | |
PCBlockDiagonal | |
PCBlockDiagonal::PCBlockDiagonalContext | |
PCLDUFactorisation | |
PCLDUFactorisation::PCLDUFactorisationContext | |
PCTwoLevelsBlockDiagonal | |
PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext | |
PdeAndBoundaryConditions< DIM > | |
PdeSimulationTime | |
PetscMatTools | |
PetscSetupUtils | |
PetscTools | |
PetscVecTools | |
PostProcessingWriter< ELEMENT_DIM, SPACE_DIM > | |
PottsElementData | |
PottsMesh< DIM >::PottsElementIterator | |
PottsMeshGenerator< DIM > | |
ProcessSpecificArchive< Archive > | |
ProgressReporter | |
PropagationPropertiesCalculator | |
QuadraticBasisFunction< ELEMENT_DIM > | |
QuadraticBasisFunction< 0 > | |
QuadraticMeshHelper< DIM > | |
QuadraturePointsGroup< DIM > | |
RelativeTo | |
ReplicatableVector | |
SimpleDataWriter | |
splaynode | |
StressRecoveror< DIM > | |
TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator | |
Timer | |
TimeStepper | |
VertexElementData | |
VertexElementMap | |
VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator | |
VoltageInterpolaterOntoMechanicsMesh< DIM > | |
VoronoiVertexMeshGenerator | |
VtkNonlinearElasticitySolutionWriter< DIM > | |
Warnings | |
XmlTools | |
XmlTools::Finalizer | |
XmlTransforms | |
bool | |
double | |
Mat | |
N_Vector | |
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | |
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > * | |
PetscInt | |
static const unsigned | |
vector< AbstractChasteRegion< ELEMENT_DIM > * > | |
vector< boost::shared_ptr< AbstractCellBasedSimulationModifier< ELEMENT_DIM, ELEMENT_DIM > > > | |
vector< boost::shared_ptr< AbstractCellKiller< ELEMENT_DIM > > > | |
vector< boost::shared_ptr< AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, ELEMENT_DIM > > > | |
vector< boost::shared_ptr< AbstractCellPopulationCountWriter< ELEMENT_DIM, ELEMENT_DIM > > > | |
vector< boost::shared_ptr< AbstractCellPopulationWriter< ELEMENT_DIM, ELEMENT_DIM > > > | |
vector< boost::shared_ptr< AbstractCellWriter< ELEMENT_DIM, ELEMENT_DIM > > > | |
vector< boost::shared_ptr< AbstractForce< ELEMENT_DIM, ELEMENT_DIM > > > | |
vector< std::std::string > | |
unsigned | |
Vec | |